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Journal Articles

Parallel filtering in global gyrokinetic simulations

Jolliet, S.; McMillan, B. F.*; Villard, L.*; Vernay, T.*; Angelino, P.*; Tran, T. M.*; Brunner, S.*; Bottino, A.*; Idomura, Yasuhiro

Journal of Computational Physics, 231(3), p.745 - 758, 2012/02

 Times Cited Count:13 Percentile:60.62(Computer Science, Interdisciplinary Applications)

Journal Articles

Transport and turbulence with innovative plasma shapes in the TCV tokamak

Labit, B.*; Pochelon, A.*; Rancic, M.*; Piras, F.*; Bencze, A.*; Bottino, A.*; Brunner, S.*; Camenen, Y.*; Chattopadhyay, P. K.*; Coda, S.*; et al.

Proceedings of 23rd IAEA Fusion Energy Conference (FEC 2010) (CD-ROM), 8 Pages, 2011/03

Journal Articles

Gyrokinetic simulations of turbulent transport; Size scaling and chaotic behaviour

Villard, L.*; Bottino, A.*; Brunner, S.*; Casati, A.*; Chowdhury, J.*; Dannert, T.*; Ganesh, R.*; Garbet, X.*; G$"o$rler, T.*; Grandgirard, V.*; et al.

Plasma Physics and Controlled Fusion, 52(12), p.124038_1 - 124038_18, 2010/11

 Times Cited Count:20 Percentile:60.27(Physics, Fluids & Plasmas)

Journal Articles

System size effects on gyrokinetic turbulence

McMillan, B. F.*; Lapillonne, X.*; Brunner, S.*; Villard, L.*; Jolliet, S.; Bottino, A.*; G$"o$rler, T.*; Jenko, F.*

Physical Review Letters, 105(15), p.155001_1 - 155001_4, 2010/10

 Times Cited Count:103 Percentile:93.54(Physics, Multidisciplinary)

Journal Articles

Global nonlinear electromagnetic simulations of tokamak turbulence

Bottino, A.*; Scott, B. D.*; Brunner, S.*; McMillan, B. F.*; Tran, T. M.*; Vernay, T.*; Villard, L.*; Jolliet, S.; Hatzky, R.*; Peeters, A. G.*

IEEE Transactions on Plasma Science, 38(9), p.2129 - 2135, 2010/09

 Times Cited Count:26 Percentile:69.17(Physics, Fluids & Plasmas)

Journal Articles

A Global collisionless PIC code in magnetic coordinates

Jolliet, S.*; Bottino, A.*; Angelino, P.*; Hatzky, R.*; Tran, T. M.*; McMillan, B. F.*; Sauter, O.*; Appert, K.*; Idomura, Yasuhiro; Villard, L.*

Computer Physics Communications, 177(5), p.409 - 425, 2007/09

 Times Cited Count:183 Percentile:98.53(Computer Science, Interdisciplinary Applications)

A global plasma turbulence simulation code, ORB5, is presented. A particular feature is the use of straight-field-line magnetic coordinates and a field-aligned Fourier filtering technique that dramatically improves the performance of the code in terms of both the numerical noise reduction and the maximum time step allowed. Another feature is the capability to treat arbitrary axisymmetric ideal MHD equilibrium configurations. The code is validated against an analytical theory of zonal flows and against other codes for a selection of linear and nonlinear tests.

Oral presentation

Gyrokinetic PIC simulation of trapped electron mode turbulence

Jolliet, S.*; Villard, L.*; Idomura, Yasuhiro; McMillan, B. F.*; Bottino, A.*; Lapillonne, X.*

no journal, , 

no abstracts in English

Oral presentation

Global nonlinear particle-in-cell simulations of trapped-electron-mode turbulence

Jolliet, S.; McMillan, B. F.*; Bottino, A.*; Angelino, P.*; Lapillonne, X.*; Vernay, T.*; Idomura, Yasuhiro; Villard, L.*

no journal, , 

Oral presentation

System size and shear flow effects on ITG turbulence

McMillan, B. F.*; Jolliet, S.; Tran, T. M.*; Bottino, A.*; Lapillonne, X.*; Villard, L.*

no journal, , 

Oral presentation

Performance portability of Ensemble Kalman Filter using C++ senders/receivers

Asahi, Yuichi; Hasegawa, Yuta; Padioleau, T.*; Millan, A.*; Bigot, J.*; Grandgirard, V.*; Obrejan, K.*

no journal, , 

Generally, production-ready scientific simulations consist of many different tasks including computations, communications and file I/O. Compared to the accelerated computations with GPUs, communications and file I/O would be slower which can be major bottlenecks. It is thus quite important to manage these tasks concurrently to suppress these costs. In the present talk, we employ the proposed language standard C++ senders/receivers to mask the costs of communications and file I/O. As a case study, we implement a 2D turbulence simulation code with the local ensemble transform Kalman filter (LETKF) using C++ senders/receivers. In LETKF, the mock observation data are read from files followed by MPI communications and dense matrix operations on GPUs. We demonstrate the performance portable implementation with this framework, while exploiting the performance gain with the introduced concurrency.

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