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Kawakita, Ryohei; Saito, Akito*; Sakuma, Hiroshi*; Anraku, Sohtaro; Kikuchi, Ryosuke*; Otake, Tsubasa*; Sato, Tsutomu*
Applied Clay Science, 231, p.106722_1 - 106722_7, 2023/01
Times Cited Count:1 Percentile:17.48(Chemistry, Physical)Omasa, Yoshinori*; Takagi, Shigeyuki*; Toshima, Kento*; Yokoyama, Kaito*; Endo, Wataru*; Orimo, Shinichi*; Saito, Hiroyuki*; Yamada, Takeshi*; Kawakita, Yukinobu; Ikeda, Kazutaka*; et al.
Physical Review Research (Internet), 4(3), p.033215_1 - 033215_9, 2022/09
Tominaga, Taiki*; Sahara, Masae*; Kawakita, Yukinobu; Nakagawa, Hiroshi; Yamada, Takeshi*
Journal of Applied Crystallography, 54(6), p.1631 - 1640, 2021/12
Times Cited Count:4 Percentile:53.77(Chemistry, Multidisciplinary)Nakagawa, Hiroshi; Saio, Tomohide*; Nagao, Michihiro*; Inoue, Rintaro*; Sugiyama, Masaaki*; Ajito, Satoshi; Tominaga, Taiki*; Kawakita, Yukinobu
Biophysical Journal, 120(16), p.3341 - 3354, 2021/08
Times Cited Count:4 Percentile:36.25(Biophysics)A multi-domain protein can have various conformations in solution. Interactions with other molecules result in the stabilization of one of the conformations and change in the domain dynamics. SAXS, a well-established experimental technique, can be employed to elucidate the conformation of a multi-domain protein in solution. NSE spectroscopy is a promising technique for recording the domain dynamics in nanosecond and nanometer scale. Despite the great efforts, there are still under development. Thus, we quantitatively removed the contribution of diffusion dynamics and hydrodynamic interactions from the NSE data via incoherent scattering, revealing the differences in the domain dynamics of the three functional states of a multi-domain protein, MurD. The differences among the three states can be explained by two domain modes.
Tominaga, Taiki*; Kawakita, Yukinobu; Nakagawa, Hiroshi; Yamada, Takeshi*; Shibata, Kaoru
JPS Conference Proceedings (Internet), 33, p.011086_1 - 011086_5, 2021/03
We developed a quartz double cylindrical sample cell optimized for a backscattering neutron spectrometer, especially for BL02 (DNA), MLF in J-PARC. A quartz glass tube, with one end closed, is shaved to obtain a wall thickness of 0.55 mm. The inner tube is properly centered using a protrusion into the outer tube such that the interstice between the outer and inner tubes keeps constant. This quartz cell can be used for samples that should not be in contact with the aluminum surface. We verified cell's background effect between the quartz cell and Al cell by QENS measurements using DO buffer. The elastic intensity profiles of the buffer in a low Q region were identical between both quartz cell and Al cell (A1070). In a high Q region, however, the profiles were different caused by the first sharp diffraction peak of quartz glass. For this region the data should be analyzed by consideration of absorption correction and diffraction in individual thickness of quartz cell.
Tominaga, Taiki*; Sahara, Masae*; Kawakita, Yukinobu; Nakagawa, Hiroshi; Shimamoto, Naonobu*
JPS Conference Proceedings (Internet), 33, p.011094_1 - 011094_5, 2021/03
In quasielastic neutron scattering studies, aluminum or aluminum alloys are frequently employed as sample cells. With the increasing incident-neutron flux, the research area currently continues to expand; thus, obtaining data has become quicker than ever for dilute conditions. One such area is the water-containing systems. In this study, we investigated the effect of temperature on Al and found that even in a low temperature atmosphere, Al corrosion can occur. This was attributed to the different thermal expansion coefficients of Al as a base substrate and Al oxide as a passivating film.
Matsuura, Masato*; Yamada, Takeshi*; Tominaga, Taiki*; Kobayashi, Makoto*; Nakagawa, Hiroshi; Kawakita, Yukinobu
JPS Conference Proceedings (Internet), 33, p.011068_1 - 011068_6, 2021/03
The position dependence of the scattered intensity in the time-of-flight backscattering spectrometer DNA was investigated. A periodic structure for both vertical (pixel) and horizontal (PSD) directions was observed. The solar slit and over-bending of an analyzer crystal is discussed as a possible origin of the modulation in the intensity. We have developed software program for the systematic correction of the position-dependent intensity and offset energy for the elastic peak. This corrects the deviation from the true scattering intensity and improve the quality of the data, which includes the energy resolution.
Inoue, Rintaro*; Oda, Takashi*; Nakagawa, Hiroshi; Tominaga, Taiki*; Saio, Tomohide*; Kawakita, Yukinobu; Shimizu, Masahiro*; Okuda, Aya*; Morishima, Ken*; Sato, Nobuhiro*; et al.
Scientific Reports (Internet), 10, p.21678_1 - 21678_10, 2020/12
Times Cited Count:3 Percentile:12.68(Multidisciplinary Sciences)Incoherent quasielastic neutron scattering (iQENS) is a fascinating technique for investigating the internal dynamics of protein. However, both low flux of neutron beam and absence of analytical procedure for extracting the internal dynamics from iQENS profile have been obstacles for studying it under physiological condition (in solution). Thanks to the recent development of neutron source, spectrometer and computational technique, they enable us to decouple internal dynamics, translational and rotational diffusions from the iQENS profile. The internal dynamics of two proteins: globular domain protein (GDP) and intrinsically disordered protein (IDP) in solution were studied. It was found that the average relaxation rate of IDP was larger than that of GDP. Through the detailed analyses on their internal dynamics, it was revealed that the fraction of mobile H atoms in IDP was much higher than that in GDP. Interestingly, the fraction of mobile H atoms was closely related to the fraction of H atoms on highly solvent exposed surfaces. The iQENS study presented that the internal dynamics were governed by the highly solvent exposed amino acid residues depending upon protein molecular architectures.
Kadowaki, Hiroaki*; Wakita, Mika*; Fk, B.*; Ollivier, J.*; Kawamura, Seiko; Nakajima, Kenji; Takatsu, Hiroshi*; Tamai, Mototake*
Journal of the Physical Society of Japan, 87(6), p.064704_1 - 064704_6, 2018/06
Times Cited Count:9 Percentile:56.77(Physics, Multidisciplinary)The ground states of the frustrated pyrochlore oxide TbTiO have been studied by inelastic neutron scattering experiments. Three single-crystal samples are investigated; one shows no phase transition (), being a putative quantum spin-liquid (QSL), and the other two () show electric quadrupole ordering (QO) below K. The QSL sample shows continuum excitation spectra with an energy scale 0.1 meV as well as energy-resolution-limited (nominally) elastic scattering. As is increased, pseudospin wave of the QO state emerges from this continuum excitation, which agrees with that of powder samples and consequently verifies good control for the present single crystal samples.
Sugiyama, Masaaki*; Nakagawa, Hiroshi; Inoue, Rintaro*; Kawakita, Yukinobu
JAEA-Review 2017-024, 40 Pages, 2017/12
Now-a-days, promotion of life science by utilizing neutron (neutrons biology) is highly demanded in our country, following installation and improvement of high quality and intensity neutron sources at J-PARC and JRR-3. Aiming at accelerating development of neutrons biology in our country, an international workshop "Neutron biology for next generation" was held as a J-PARC Workshop at Ibaraki Quantum Beam Research Center from 22 March to 23 March in 2017. In the workshop, latest instruments, new-fashioned methodologies, recent scientific results and future perspectives were extensively discussed by domestic neutron instrumental scientists and domestic/foreign neutron biologists. This is a report of the workshop summarized by organizers.
Seto, Hideki; Ito, Shinichi; Yokoo, Tetsuya*; Endo, Hitoshi*; Nakajima, Kenji; Shibata, Kaoru; Kajimoto, Ryoichi; Kawamura, Seiko; Nakamura, Mitsutaka; Kawakita, Yukinobu; et al.
Biochimica et Biophysica Acta; General Subjects, 1861(1), p.3651 - 3660, 2017/01
Times Cited Count:32 Percentile:80.16(Biochemistry & Molecular Biology)J-PARC, Japan Proton Accelerator Research Complex provides short pulse proton beam at a repetition rate 25 Hz and the maximum power is expected to be 1 MW. Materials and Life Science Experimental Facility (MLF) has 23 neutron beam ports and 21 instruments have already been operated or under construction / commissioning. There are 6 inelastic / quasi-elastic neutron scattering spectrometers and the complementary use of these spectrometers will open new insight for life science.
Takahashi, Nobuaki; Shibata, Kaoru; Kawakita, Yukinobu; Nakajima, Kenji; Inamura, Yasuhiro; Nakatani, Takeshi; Nakagawa, Hiroshi; Fujiwara, Satoru; Sato, Taku*; Tsukushi, Itaru*; et al.
Journal of the Physical Society of Japan, 80(Suppl.B), p.SB007_1 - SB007_4, 2011/12
Times Cited Count:6 Percentile:43.21(Physics, Multidisciplinary)Morioka, Chiharu*; Shimazaki, Kazunori*; Kawakita, Shiro*; Imaizumi, Mitsuru*; Yamaguchi, Hiroshi*; Takamoto, Tatsuya*; Sato, Shinichiro; Oshima, Takeshi; Nakamura, Yosuke*; Hirako, Keiichi*; et al.
Progress in Photovoltaics; Research and Applications, 19(7), p.825 - 833, 2011/11
Times Cited Count:24 Percentile:68.19(Energy & Fuels)Shibata, Kaoru; Takahashi, Nobuaki; Nakagawa, Hiroshi; Fujiwara, Satoru; Kataoka, Mikio; Sato, Taku*; Kawakita, Yukinobu*; Tsukushi, Itaru*
Nihon Kessho Gakkai-Shi, 50(1), p.46 - 50, 2008/02
The instrumental design of an indirect geometry crystal analyzer spectrometer: DNA which is scheduled to be constructed in the Material and Life Science experimental Facility (MLF) at J-PARC, is reported in this article. This spectrometer is mainly aimed at searching for the high quality inelastic scattering spectra with only several mg order biomolecular sample in the plenty of wide range of energy and momentum transfers.
Azuma, Shunichi*; Ishii, Hiroshi*; Asai, Yasuhiro*; Kitagawa, Yuichi*; Wakita, Hiroshi*; Yamauchi, Tsuneo*; Asamori, Koichi
Geodynamics of Atotsugawa Fault System, p.173 - 179, 2007/00
no abstracts in English
Ozu, Akira; Esaka, Fumitaka; Kawakita, Hiroshi*; Okamoto, Ryuta*; Imaki, Masaharu*; Kobayashi, Takao*
Reviewed and Revised Papers Presented at the 23rd International Laser Radar Conference (ILRC-23), p.107 - 108, 2006/07
We have demonstrated that asbestos particles in air can be visualized with laser-induced fluorescence emitted from asbestos. A ultra-violet (266 nm) laser pulse is used to excite asbestos particles suspended in a closed vessel. The fluorescence emitted from the asbestos in the region where the laser beam passes through is detected with a low-pass optical filter and an image intensified CCD camera with ultra-fast gate shutter. Many asbestos particles in the region are separately visualized on an image. It is possible to derive from the image the number and size of asbestos particles through image data processing. The method described in this study is expected to be useful in real-time monitoring of the concentration of asbestos particle.
Matsuura, Hideharu*; Iwata, Hiroshi*; Kagamihara, So*; Ishihara, Ryohei*; Yoneda, Masahiko*; Imai, Hideaki*; Kikuta, Masanori*; Inoue, Yuki*; Hisamatsu, Tadashi*; Kawakita, Shiro*; et al.
Japanese Journal of Applied Physics, Part 1, 45(4A), p.2648 - 2655, 2006/04
Times Cited Count:15 Percentile:49.14(Physics, Applied)no abstracts in English
Ozu, Akira; Okamoto, Ryuta*; Kawakita, Hiroshi*
Kurin Tekunoroji, 16(3), p.56 - 61, 2006/03
In recent years, particle counting devices capable of monitoring particles suspended in air on real-time basis are of considerable practical concern in the fields of semiconductor and large display panel industries. A remote particle counter, which had been developed for monitoring aerosols released in air from nuclear facilities, has been applied to a measurement system for clean rooms used in the fields. It can visualize the particles in narrow space at a distance of 6m and derive the number and size distribution of particles with diameter of above 0.5 microns. By improving the laser energy, sensitivity of the image intensifier camera, and magnification of the zoom lens used in the system, it is possible to detect the particles with diameters of below 0.5 microns. The method and the current performance of the measurement system are described.
Iwata, Hiroshi*; Kagamihara, Satoshi*; Matsuura, Hideharu*; Kawakita, Shiro*; Oshima, Takeshi; Kamiya, Tomihiro
Proceedings of the 6th International Workshop on Radiation Effects on Semiconductor Devices for Space Application (RASEDA-6), p.143 - 146, 2004/10
no abstracts in English
Suzuki, Masatoshi; Hazawa, Tomoya; Ishizaki, Yoichi*; Obara, Michio*; Inada, Katsutoshi*; Yonekawa, Mitsunori*; Wakita, Hiroshi*
JAERI-Tech 2004-060, 153 Pages, 2004/09
The cold neutron source (CNS) at JRR-3 was constructed for the purpose of improving the utilization performance of the reactor along the lines of upgrade program. There are two methods for extracting cold neutrons from a reactor, one is to filter a small fraction of cold neutrons in the Maxwellian spectrum of reactor neutrons while the other is to increase the fraction of cold neutron by inserting a cryogenic moderator. The latter is adopted as CNS facilities at almost all cases, and liquid hydrogen and its cooling system are equipped with a cold neutron source at many neutron facilities just like JRR-3. Cold neutrons generated in a cold source are extracted through a neutron guide tube, and are utilized for the purpose of neutron beam experiments such as neutron scattering which study the structures of atoms and molecules in the materials and life science fields. This report summarizes the operation data and the main technical issues which were recorded in the whole operation period from commencement date in 1989 to March 2004.