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Clades of huge phages from across Earth's ecosystems

Al-Shayeb, B.*; Sachzdeva, R.*; Chen, L.-X.*; Ward, F.*; Munk, P.*; Devoto, A.*; Castelle, C. J.*; Olm, M. R.*; Bouma-Gregson, K.*; 天野 由記; et al.

Nature, 578(7795), p.425 - 431, 2020/02

 被引用回数:20 パーセンタイル:0.48(Multidisciplinary Sciences)

Phage typically have small genomes and depend on their bacterial hosts for replication. We generated metagenomic datasets from many diverse ecosystems and reconstructed hundreds of huge phage genomes, between 200 kbp and 716 kbp in length. Thirty four genomes were manually curated to completion, including the largest phage genomes yet reported. Expanded genetic repertoires include diverse and new CRISPR-Cas systems, tRNAs, tRNA synthetases, tRNA modification enzymes, initiation and elongation factors and ribosomal proteins. Phage CRISPR have the capacity to silence host transcription factors and translational genes, potentially as part of a larger interaction network that intercepts translation to redirect biosynthesis to phage-encoded functions. Some phage repurpose bacterial systems for phage-defense to eliminate competing phage. We phylogenetically define seven major clades of huge phage from human and other animal microbiomes, oceans, lakes, sediments, soils and the built environment. We conclude that large gene inventories reflect a conserved biological strategy, observed across a broad bacterial host range and resulting in the distribution of huge phage across Earth's ecosystems.


Ultralow thermal conductivity from transverse acoustic phonon suppression in distorted crystalline $$alpha$$-MgAgSb

Li, X.*; Liu, P.-F.*; Zhao, E.*; Zhang, Z.*; Guide, T.*; Le, M. D.*; Avdeev, M.*; 池田 一貴*; 大友 季哉*; 古府 麻衣子; et al.

Nature Communications (Internet), 11(1), p.942_1 - 942_9, 2020/02

 被引用回数:2 パーセンタイル:28.87(Multidisciplinary Sciences)



Fine structure in the $$alpha$$ decay of $$^{218}$$At

Cubiss, J. G.*; Andreyev, A. N.; Barzakh, A. E.*; Andel, B.*; Antalic, S.*; Cocolios, T. E.*; Day Goodacre, T.*; Fedorov, D. V.*; Fedosseev, V. N.*; Ferrer, R.*; et al.

Physical Review C, 99(6), p.064317_1 - 064317_6, 2019/06

 被引用回数:3 パーセンタイル:24.4(Physics, Nuclear)



Inverse odd-even staggering in nuclear charge radii and possible octupole collectivity in $$^{217,218,219}$$At revealed by in-source laser spectroscopy

Barzakh, A. E.*; Cubiss, J. G.*; Andreyev, A. N.; Seliverstov, M. D.*; Andel, B.*; Antalic, S.*; Ascher, P.*; Atanasov, D.*; Beck, D.*; Biero$'n$, J.*; et al.

Physical Review C, 99(5), p.054317_1 - 054317_9, 2019/05

 被引用回数:3 パーセンタイル:24.4(Physics, Nuclear)

Hyperfine-structure parameters and isotope shifts for the 795-nm atomic transitions in $$^{217,218,219}$$At have been measured at CERN-ISOLDE, using the in-source resonance-ionization spectroscopy technique. Magnetic dipole and electric quadrupole moments, and changes in the nuclear mean-square charge radii, have been deduced. A large inverse odd-even staggering in radii, which may be associated with the presence of octupole collectivity, has been observed. Namely, the radius of the odd-odd isotope $$^{218}$$At has been found to be larger than the average.


Colossal barocaloric effects in plastic crystals

Li, B.*; 川北 至信; 河村 聖子; 菅原 武*; Wang, H.*; Wang, J.*; Chen, Y.*; 河口 沙織*; 河口 彰吾*; 尾原 幸治*; et al.

Nature, 567(7749), p.506 - 510, 2019/03

 被引用回数:39 パーセンタイル:1.11(Multidisciplinary Sciences)



Pressure-induced Diels-Alder reactions in C$$_{6}$$H$$_{6}$$ - C$$_{6}$$F$$_{6}$$ cocrystal towards graphane structure

Wang, Y.*; Dong, X.*; Tang, X.*; Zheng, H.*; Li, K.*; Lin, X.*; Fang, L.*; Sun, G.*; Chen, X.*; Xie, L.*; et al.

Angewandte Chemie; International Edition, 58(5), p.1468 - 1473, 2019/01

 被引用回数:3 パーセンタイル:45.44(Chemistry, Multidisciplinary)

芳香族の圧力誘起重合反応(PIP)は、sp$$^{3}$$炭素骨格を構築するための新しい方法であり、ベンゼンとその誘導体を圧縮することによってダイヤモンド様構造を有するナノスレッドを合成した。ここで、ベンゼン-ヘキサフルオロベンゼン共結晶(CHCF)を圧縮することにより、PIP生成物中に層状構造を有するH-F置換グラフェンを同定した。その場中性子回折から決定された結晶構造およびガスクロマトグラフィー質量スペクトルによって同定された中間生成物に基づいて、20GPaでは、CHCFがベンゼンおよびヘキサフルオロベンゼンを交互に積み重ねた傾斜カラムを形成し、それらが[4+2]重合体に転化し、次いで、短距離秩序を持つ水素化フッ素化グラフェンに変化する。反応プロセスは[4+2]ディールス-アルダー, レトロディールス-アルダー、および1-1'カップリング反応を含み、前者はPIPの重要な反応である。われわれの研究は、CHCFの素反応を初めて確認した。これは、芳香族化合物のPIPについての新しい見方を提供する。


Overall approaches and experiences of first-time participants in the Nuclear Forensics International Technical Working Group's Fourth Collaborative Material Exercise (CMX-4)

Ho, D. M. L.*; Nelwamondo, A. N.*; 大久保 綾子; Rameb$"a$ck, H.*; Song, K.*; Han, S.-H.*; Hancke, J. J.*; Holmgren, S.*; Jonsson. S.*; 片岡 修; et al.

Journal of Radioanalytical and Nuclear Chemistry, 315(2), p.353 - 363, 2018/02

 被引用回数:0 パーセンタイル:100(Chemistry, Analytical)



SFCOMPO-2.0; An OECD NEA database of spent nuclear fuel isotopic assays, reactor design specifications, and operating data

Michel-Sendis, F.*; Gauld, I.*; Martinez, J. S.*; Alejano, C.*; Bossant, M.*; Boulanger, D.*; Cabellos, O.*; Chrapciak, V.*; Conde, J.*; Fast, I.*; et al.

Annals of Nuclear Energy, 110, p.779 - 788, 2017/12

 被引用回数:17 パーセンタイル:2.87(Nuclear Science & Technology)

SFCOMPO-2.0 is the new release of the NEA database of experimentally measured assays, i.e. isotopic concentrations from destructive radiochemical analyses of spent nuclear fuel samples, complemented with design information of the fuel assembly and fuel rod from which each sample was taken, as well as with relevant information on operating conditions and characteristics of the host reactors, which are necessary for the modelling and simulation of the isotopic evolution of the fuel during irradiation. SFCOMPO-2.0 has been developed and is maintained by the OECD Nuclear Energy Agency (NEA) under the guidance of the Expert Group on Assay Data of Spent Nuclear Fuel (EGADSNF) of the NEA Working Party on Nuclear Criticality Safety (WPNCS). In this paper, the new database is described. Applications of SFCOMPO-2.0 for computer code validation, integral nuclear data benchmarking, and uncertainty analysis in nuclear waste package analysis are briefly illustrated.


Hydroformylation of olefins by a rhodium single-atom catalyst with activity comparable to RhCl(PPh$$_{3}$$)$$_{3}$$

Lang, R.*; Li, T.*; 松村 大樹; Miao, S.*; Ren, Y.*; Cui, Y.-T.*; Tan, Y.*; Qiao, B.*; Li, L.*; Wang, A.*; et al.

Angewandte Chemie; International Edition, 55(52), p.16054 - 16058, 2016/12

Single-atom catalysts have the advantages of both homogeneous catalysts, such as "isolated sites", and heterogeneous catalysts, such as stability and reusability, and thus would be a promising alternative to traditional homogeneous catalysts. In the hydroformylation of olefins, single-atom Rh catalysts supported on ZnO nanowires demonstrate similar efficiency (TON $$approx$$ 40000) compared to that of homogeneous Wilkinson's catalyst (TON $$approx$$ 19000). HAADF-STEM and infrared CO chemisorption experiments identified isolated Rh atoms on the support. XPS and XANES spectra indicate that the electronic state of Rh is almost metallic. The catalysts are about one or two orders of magnitude more active than most reported heterogeneous catalysts and can be reused four times without an obvious decline in activity.


$$beta$$-delayed fission and $$alpha$$ decay of $$^{196}$$At

Truesdale, V. L.*; Andreyev, A.; Ghys, L.*; Huyse, M.*; Van Duppen, P.*; Sels, S.*; Andel, B.*; Antalic, S.*; Barzakh, A.*; Capponi, L.*; et al.

Physical Review C, 94(3), p.034308_1 - 034308_11, 2016/09

 被引用回数:7 パーセンタイル:36.92(Physics, Nuclear)

A nuclear-decay spectroscopy study of the neutron-deficient isotope $$^{196}$$At is reported where an isotopically pure beam was produced using the selective Resonance Ionization Laser Ion Source and On-Line Isotope Mass Separator (CERN). The fine-structure $$alpha$$ decay of $$^{196}$$At allowed the low-energy excited states in the daughter nucleus $$^{192}$$Bi to be investigated. A $$beta$$-delayed fission study of $$^{196}$$At was also performed. A mixture of symmetric and asymmetric fission-fragment mass distributions of the daughter isotope $$^{196}$$Po (populated by $$beta$$ decay of $$^{196}$$At) was deduced based on the measured fission-fragment energies. A $$beta$$DF probability $$P_{rm beta DF}$$($$^{196}$$At) = 9(1)$$times$$10$$^{-5}$$ was determined.


Colossal negative thermal expansion induced by magnetic phase competition on frustrated lattices in Laves phase compound (Hf,Ta)Fe$$_2$$

Li, B.; Luo, X. H.*; Wang, H.*; Ren, W. J.*; Yano, S.*; Wang, C.-W.*; Gardner, J. S.*; Liss, K.-D.*; Miao, P.*; Lee, S.-H.*; et al.

Physical Review B, 93(22), p.224405_1 - 224405_6, 2016/06

 被引用回数:20 パーセンタイル:20.76(Materials Science, Multidisciplinary)

Competition between ferromagnetic and antiferromagnetic phases on frustrated lattices in hexagonal Laves phase compound Hf$$_{0.86}$$Ta$$_{0.14}$$Fe$$_2$$ is investigated by using neutron diffraction as a function of temperature and magnetic fields and density-functional-theory calculations. At 325 K, the compound orders into the 120$$^{circ}$$ frustrated antiferromagnetic state with well-reduced magnetic moment and an in-plane lattice contraction simultaneously sets in. With further cooling down, however, the accumulated distortion in turn destabilizes this susceptible frustrated structure. The frustration is completely relieved at 255 K when the first-order transition to the ferromagnetic state takes place, where a colossal negative volumetric thermal expansion, $$-123 times 10^{-6}$$/K, is obtained. Meanwhile, the antiferromagnetic state can be suppressed by few Tesla magnetic fields, which results in a colossal positive magnetostriction. Such delicate competition is attributed to the giant magnetic fluctuation inherent in the frustrated antiferromagnetic state. Therefore, the magnetoelastic instability is approached even under a small perturbation.


Shapes of $$^{192,190}$$Pb ground states from $$beta$$-decay studies using the total-absorption technique

Est$'e$vez Aguado, M. E.*; Algora, A.*; Agramunt, J.*; Rubio, B.*; Tain, J. L.*; Jord$'a$n, D.*; Fraile, L. M.*; Gelletly, W.*; Frank, A.*; Csatl$'o$s, M.*; et al.

Physical Review C, 92(4), p.044321_1 - 044321_8, 2015/10

 被引用回数:10 パーセンタイル:30.92(Physics, Nuclear)

The $$beta$$ decay of $$^{192,190}$$Pb has been studied using the total absorption technique at the ISOLDE (CERN) facility. The $$beta$$-decay strength deduced from the measurements, combined with QRPA theoretical calculations, allow us to infer that the ground states of the $$^{192,190}$$Pb isotopes are spherical. These results represent the first application of the shape determination method using the total absorption technique for heavy nuclei and in a region where there is considerable interest in nuclear shapes and shape effects.


Internal decay of the (10$$^{-}$$) intruder state in $$^{184}$$Tl

Van Beveren, C.*; Andreyev, A.; Barzakh, A.*; Cocolios, T. E.*; Fedorov, D.*; Fedosseev, V. N.*; Ferrer, R.*; Huyse, M.*; K$"o$ster, U.*; Lane, J. F. W.*; et al.

Physical Review C, 92(1), p.014325_1 - 014325_8, 2015/07

 被引用回数:7 パーセンタイル:41.66(Physics, Nuclear)

Decay spectroscopy of $$^{184}$$Tl has been performed at the CERN Isotope Separator On-Line (ISOLDE) facility. An excitation energy of 506.1(1) keV and a half-life of 47.1(7) ms of the intruder based (10$$^{-}$$) state have been extracted. The internal decay characteristics of this state are determined and discussed, extending the systematics of such states in the even-mass thallium nuclei below neutron midshell at N = 104. The retardation factors of the isomeric M2 and E3 transitions are deduced and compared with retardation factors in neighboring odd-mass and even-mass thallium isotopes. The new information is combined with a review of hindered and unhindered $$alpha$$-decay data of $$^{187-192}$$Bi populating levels in daughter nuclei $$^{183-188}$$Tl and supports the interpretation of the intruder character of the (10$$^{-}$$) state in $$^{184}$$Tl.


In-source laser spectroscopy with the laser ion source and trap; First direct study of the ground-state properties of $$^{217,219}$$Po

Fink, D. A.*; Cocolios, T. E.*; Andreyev, A.; Antalic, S.*; Barzakh, A. E.*; Bastin, B.*; Fedorov, D. V.*; Fedosseev, V. N.*; Flanagan, K. T.*; Ghys, L.*; et al.

Physical Review X, 5(1), p.011018_1 - 011018_15, 2015/01

 被引用回数:17 パーセンタイル:20.83(Physics, Multidisciplinary)

A Laser Ion Source and Trap (LIST) for a thick-target, isotope-separation on-line facility has been implemented at CERN ISOLDE for the production of pure, laser-ionized, radioactive ion beams. The first physics application of the LIST enables the suppression of francium contamination in ion beams of neutron-rich polonium isotopes at ISOLDE by more than 1000 with a reduction in laser-ionization efficiency of only 20. Resonance ionization spectroscopy is performed directly inside the LIST device, allowing the study of the hyperfine structure and isotope shift of $$^{217}$$Po for the first time. Nuclear decay spectroscopy of $$^{219}$$Po is performed for the first time, revealing its half-life, $$alpha$$-to-$$beta$$-decay branching ratio, and $$alpha$$-particle energy. This experiment demonstrates the applicability of the LIST at radioactive ion-beam facilities for the production and study of pure beams of exotic isotopes.


First prompt in-beam $$gamma$$-ray spectroscopy of a superheavy element; The $$^{256}$$Rf

Rubert, J.*; Dorvaux, O.*; Gall, B. J. P.*; Greenlees, P. T.*; Asfari, Z.*; Piot, J.*; Andersson, L. L.*; 浅井 雅人; Cox, D. M.*; Dechery, F.*; et al.

Journal of Physics; Conference Series, 420, p.012010_1 - 012010_10, 2013/03

 被引用回数:0 パーセンタイル:100

初めての超重元素即発インビーム$$gamma$$線分光実験を$$^{256}$$Rfを対象に行った。MIVOC法を用いた大強度$$^{50}$$Tiビームの開発を行い、実験を成功させた。$$^{256}$$Rfの回転励起状態をスピン20 $$hbar$$まで観測し、その慣性能率を導出した。これらのデータから、陽子数104には大きな変形閉殻が存在しないことが明らかとなった。


Shell-structure and pairing interaction in superheavy nuclei; Rotational properties of the $$Z$$=104 nucleus $$^{256}$$Rf

Greenlees, P. T.*; Rubert, J.*; Piot, J.*; Gall, B. J. P.*; Andersson, L. L.*; 浅井 雅人; Asfari, Z.*; Cox, D. M.*; Dechery, F.*; Dorvaux, O.*; et al.

Physical Review Letters, 109(1), p.012501_1 - 012501_5, 2012/07

 被引用回数:46 パーセンタイル:10.77(Physics, Multidisciplinary)



Nuclear technology aspects of ITER vessel-mounted diagnostics

Vayakis, G.*; Bertalot, L.*; Encheva, A.*; Walker, C.*; Brichard, B.*; Cheon, M. S.*; Chitarin, G.*; Hodgson, E.*; Ingesson, C.*; 石川 正男; et al.

Journal of Nuclear Materials, 417(1-3), p.780 - 786, 2011/10

 被引用回数:17 パーセンタイル:16.48(Materials Science, Multidisciplinary)

ITER has diagnostics with machine protection, basic and advanced plasma control, and physics roles. Several are embedded in the inner machine component region. They have reduced maintainability compared to standard diagnostics in ports. They also endure some of the highest nuclear and EM loads of any diagnostic for the longest time. They include: Magnetic diagnostics; Steady-state magnetic sensors on the outer vessel skin; Bolometer camera arrays; Microfission chambers and neutron activation stations to provide key inputs to the real-time fusion power and long-term fluence measurements; mm-wave reflectometry to measure the plasma density profile and perturbations near the core, and the plasma-wall distance and; Wiring deployed around the vessel to service magnetics, bolometry, and in-vessel instrumentation. In this paper we summarise the key technological issues for each of these diagnostics arising from the nuclear environment, recent progress and outstanding R&D for each system.


International Standard Problem (ISP) No.41; Containment iodine computer code exercise based on a Radionuclide Test Facility (RTF) experiment

Wren, J. C.*; Royen, J.*; Ball, J.*; Glowa, G.*; Rydl, A.*; Poletiko, C.*; Billarand, Y.*; Ewig, F.*; Funke, F.*; Zeh, P.*; et al.

NEA/CSNI/R(2000)6/Vol.1, Vol.2, 174 Pages, 2000/04

The main goal of International Standard Problem (ISP) is to increase confidence in the validity and accuracy of the tools, which were used in assessing the safety of nuclear installations. Moreover, the exercises enable code users to gain experience and demonstrate their competence. The ISP No. 41 exercise, computer code exercise based on a Radioiodine Test Facility (RTF) experiment on iodine behavior in containment under severe accident conditions, is one of such ISP exercises. The codes used by the participants were LIRIC (AECL), MELCOR-I (SNL), IMPAIR (PSI, Siemens, GRS, and JAERI) and IODE (CIEMAT, IPSN and NRIR). This report presents a detailed description of the RTF tests used for the exercise, a brief description of the models/codes used and the modelling process and the description and interpretation of the results.


International Standard Problem (ISP) No.41; Computer code comparison exercise based on a Radioiodine Test Facility (RTF) experiment on iodine behaviour in containment under severe accident conditions

Ball, J.*; Glowa, G.*; Wren, J.*; Rydl, A.*; Poletiko, C.*; Billarand, Y.*; Ewig, F.*; Funke, F.*; 日高 昭秀; Gauntt, R.*; et al.

NEA/CSNI/R(99)7, p.311 - 325, 1999/00

The ISP No.41 exercise resulted from a recommendation at the fourth iodine chemistry workshop held at PSI, Switzerland in 1996 for an International Standard Problem on iodine behavior models. The test selected for the comparison was a Radio Test Facility experiment. It was conducted in a stainless steel vessel at 25$$^{circ}$$C and at a dose rate of 1.4 kGy/h$$^{-1}$$ to evaluate the effect of pH on irradiated aqueous solutions containing CsI. This paper discusses the results of ISP 41 exercise, with a primary focus on the evaluation and comparison of calculated results, and what they demonstrate about the aqueous iodine reaction subset within each model. The paper will also discuss the relative importance of mass transfer, surface adsorption and aqueous chemistry, and the sensitivity of each of the models to these phenomena. Finally, it will assess the applicability of the ISP 41 exercise to qualitative validation of the iodine models, and provide recommendations for continuing model evaluation.


SKB GWFTS task force; Predictive modeling of a matrix diffusion experiment in gneiss at ONKALO (Finland)

Soler, J. M.*; L$"o$fgren, M.*; Nilsson, K.*; Lanyon, G. W.*; Gylling, B.*; Vidstrand, P.*; Neretnieks, I.*; Moreno, L.*; Liu, L.*; Meng, S.*; et al.

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