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Journal Articles

Continuous acceleration of soil heterotrophic respiration over 16 years of soil warming in a sub-boreal forested peatland

Ma, R.*; Takagi, Kentaro*; Kondo, Toshiaki*; Koarashi, Jun; Atarashi-Andoh, Mariko; Kobayashi, Makoto*; Aguilos, M.*; Ryhti-Laine, K.*; Sun, L.*; Takahashi, Yoshiyuki*; et al.

Soil Biology & Biochemistry, 221, p.110212_1 - 110212_10, 2026/10

 Times Cited Count:0 Percentile:0.00(Soil Science)

Journal Articles

Sustainable management for Japan's cedar stands towards national carbon neutrality

Ota, Masakazu; Takagi, Kentaro*; Liang, N.*; Takahashi, Yoshiyuki*; Koarashi, Jun

Resources, Conservation & Recycling, 235, p.109089_1 - 109089_9, 2026/09

To achieve carbon neutrality by 2050, Japan is revitalizing forestry. However, it is unclear what specific forest management method should be implemented. Using a numerical model, here we explore carbon balance and economy of currently feasible managements for Japanese cedar plantation, the Japan's most economically important stand. We show that a repetition of 45-year rotation cycle most sequesters carbon dioxide from the atmosphere, also generating highest revenue from wood production. Applying this management to domestic cedar stands contributes 35%-73% of Japan's 2030 interim target of carbon dioxide absorption by forests, offsetting 1.4%-3.0% of national net emission target. However, sustainability of the management depends on subsidies, requiring over two-thirds of forestry costs. These indicate continued and sufficient support for the forestry sector is necessary to enable Japan's cedar stands to significantly contribute to carbon neutrality.

Journal Articles

Trade-off between adsorption capacity and binding strength regulates carbon stabilization in mineral-associated organic matter

Sun, R.; Abe, Yukiko; Atarashi-Andoh, Mariko; Koarashi, Jun

Soil Biology & Biochemistry, 218, p.110150_1 - 110150_12, 2026/07

 Times Cited Count:0 Percentile:0.00(Soil Science)

The role of minerals in soil carbon sequestration has been increasingly recognized. However, the mechanism by which mineral-associated organic matter (MAOM) resists microbial decomposition remains an open question. We prepared MAOM on amorphous allophane and crystalline kaolinite with different organic matter (OM) proxies, characterized the affinity strength of these associations using isothermal titration calorimetry and X-ray photoelectron spectroscopy, and quantified their microbial mineralization through aerobic incubation. We found that amorphous allophane displayed greater OM adsorption capacity due to its higher specific surface area; in contrast, crystalline kaolinite exhibited stronger binding with OM, consistent with its predominant inner-sphere complexation. Furthermore, lower MAOM mineralization was found corresponding to higher Langmuir affinity. This inverse relationship was more pronounced than the correlation with the amount of OM adsorbed by minerals. These findings suggest that the overall MAOM stability is controlled by a balance between binding strength and adsorption capacity. Namely, stronger binding affinity enhances microbial resistance of MAOM, while the abundance of mineral sites determines the amount of MAOM accessible for microbial decomposition. This study presents a novel mechanistic understanding of the MAOM dynamics and refines the prevailing perspective on MAOM persistence.

Journal Articles

Progressive release of long-stored carbon from tropical peatland disturbances

Koarashi, Jun; Ito, Masayuki*; Atarashi-Andoh, Mariko; Kokubu, Yoko; Matsueda, Makoto; Kusin, K.*; Jaya, A.*; Dohong, S.*; Hirano, Takashi*

Nature Communications (Internet), 17, p.4369_1 - 4369_9, 2026/05

 Times Cited Count:0 Percentile:0.00(Multidisciplinary Sciences)

Tropical peatlands are globally important, millennia-old carbon sinks, yet unprecedented human-driven degradation is triggering alarming carbon emissions. Comprehensive quantification of carbon dynamics across the disturbance sequence, from peat swamp forests to drained and fire-impacted peatlands, remains a critical knowledge gap. Here we show that over 18 years (1996-2014), drainage and subsequent peat fires released approximately 30-41 kg C m$$^{-2}$$ from peatlands in Central Kalimantan, Indonesia, using radiocarbon dating of peat profiles and groundwater dissolved organic carbon. Drainage contributed 5-11 kg C m$$^{-2}$$, primarily from centuries- to millennium-old, previously waterlogged peat. Fires released 23-32 kg C m$$^{-2}$$ from peat accumulated over the past 3,000 years, initiating progressive oxidative decomposition of older peat. Extrapolation to Indonesia's disturbed peatlands suggests a release of 0.81-3.70 Gt between 1996 and 2014, with ongoing decomposition releasing an additional 0.03-0.08 Gt C annually, accelerating the impact on the global carbon balance.

Journal Articles

Relationships among non-allophanic/allophanic indicators in six Japanese forest Andosol profiles; Implications for soil classification and genesis

Alam, M. M.*; Yamakita, Eri*; Tamanna, S.*; Thae, E. P.*; Koarashi, Jun; Atarashi-Andoh, Mariko; Abe, Yukiko; Nakayama, Masataka; Mori, Yuki*; Hiradate, Shuntaro*

Soil Science and Plant Nutrition, 72(3), p.289 - 300, 2026/05

 Times Cited Count:0 Percentile:0.00(Plant Sciences)

Journal Articles

Microbial survivability during repeated extreme dry-wet cycles determines CO$$_{2}$$ emissions after rewetting of dried soils in humid temperate forests

Nakayama, Masataka*; Suzuki, Yuri; Abe, Yukiko; Taniguchi, Takeshi*; Atarashi-Andoh, Mariko; Koarashi, Jun; Nagano, Hirohiko*

Biogeochemistry, 169(2), p.15_1 - 15_15, 2026/02

 Times Cited Count:0 Percentile:0.00(Environmental Sciences)

Journal Articles

Possible transition from silandic to aluandic andosols with acidification as evidenced by detailed profile investigation of two well-preserved forest andosols in Japan

Alam, M. M.*; Yamakita, Eri*; Inoue, Yuzuru*; Koarashi, Jun; Atarashi-Andoh, Mariko; Abe, Yukiko; Nakayama, Masataka*; Mori, Yuki*; Hiradate, Shuntaro*

Soil Science and Plant Nutrition, 72(1), p.55 - 66, 2026/01

 Times Cited Count:4 Percentile:79.39(Plant Sciences)

Journal Articles

Plastics as vectors of radiocesium in river environments of Fukushima, Japan

Battulga, B.*; Nakanishi, Takahiro; Ikenoue, Tsubasa; Atarashi-Andoh, Mariko; Koarashi, Jun

Journal of Hazardous Materials, 500, p.140593_1 - 140593_11, 2025/12

 Times Cited Count:0 Percentile:0.00(Engineering, Environmental)

Journal Articles

Differential microbial roles in the organic layer and mineral soil determine radioactive cesium fate in forest ecosystems

Koarashi, Jun; Nagano, Hirohiko*; Nakayama, Masataka*; Atarashi-Andoh, Mariko; Nagaoka, Mika

Chemosphere, 389, p.144715_1 - 144715_11, 2025/11

Radiocesium ($$^{137}$$Cs) contamination poses a long-term ecological challenge, particularly in forest ecosystems. The role of soil microorganisms in determining its fate remains insufficiently understood. This study presents a dynamic assessment of microbial $$^{137}$$Cs retention, focusing on the complex interplay among microorganisms, organic matter, and clay minerals within the organic layer-mineral soil system. Our results show that rapid microbial cycling sustains a potentially bioavailable $$^{137}$$Cs pool in the organic layer. This microbial involvement diminishes as $$^{137}$$Cs activity concentrations in the organic layer decline. In the mineral soil, minimal microbial $$^{137}$$Cs retention was observed, suggesting an indirect role in facilitating $$^{137}$$Cs immobilization by clay minerals. Notably, microbial $$^{137}$$Cs retention in the organic layer is regulated by $$^{137}$$Cs availability, independent of region, forest type, and time since deposition. These findings provide a unified explanation for observed differences in $$^{137}$$Cs persistence in organic layers between European and Japanese forests.

Journal Articles

Radiocarbon-derived ages of carbon in live, dead, and newly emerged fine roots in a cool-temperate Japanese beech forest

Koarashi, Jun; Atarashi-Andoh, Mariko; Ishizuka, Shigehiro*; Noguchi, Kyotaro*; Kadono, Atsunobu*; Nakayama, Masataka*

Frontiers in Forests and Global Change (Internet), 8, p.1654883_1 - 1654883_10, 2025/11

 Times Cited Count:0 Percentile:0.00(Ecology)

Maintaining and enhancing the forest carbon (C) sinks are key to mitigating climate change; however, the forest C dynamics related to the production and turnover of fine roots ($$<$$2 mm in diameter) have not been well captured. In this study, we examined ages of C in fine roots in a cool-temperate Japanese beech forest by measuring the natural abundance of radiocarbon ($$^{14}$$C). Root samples were collected and categorized by diameter size class and live/dead status. Newly emerged roots were also obtained using the ingrowth mesh bag method. The mean ages of fine root C were estimated to be 5-23 years for live roots and 1-34 years for dead roots, respectively. In contrast, the $$^{14}$$C signatures of newly emerged roots indicated the use of current-year photosynthetic products for new root production. Given the negligible time lag between photosynthetic C fixation and the use of the fixed C for new root production, the observed ages for live fine root C suggest that plants use current-year photosynthetic products to produce new roots but utilize older ($$^{14}$$C-enriched) internally stored C to support subsequent root growth, and/or that some fine roots live for many years. Our results provide a piece of knowledge to comprehensively understand belowground C allocation processes in plants.

Journal Articles

Estimation of microbial biomass based on water-extractable organic matter from air-dried soils from Japanese forests and pasture

Nagano, Hirohiko*; Kanda, Yuki*; Suzuki, Yuri*; Hiradate, Shuntaro*; Koarashi, Jun; Atarashi-Andoh, Mariko; Guo, Z.*

Discover Soil (Internet), 2, p.27_1 - 27_9, 2025/04

Journal Articles

Evaluating sulfur-impurity removal and modern carbon contamination in different preparation methods for radiocarbon dating of soil samples by accelerator mass spectrometry

Koarashi, Jun; Takeuchi, Erina; Kokubu, Yoko; Atarashi-Andoh, Mariko

Radiocarbon, 67(2), p.307 - 317, 2025/04

 Times Cited Count:3 Percentile:58.74(Geochemistry & Geophysics)

Radiocarbon ($$^{14}$$C) dating of soil samples by accelerator mass spectrometry has been proven useful for studying carbon (C) cycling in terrestrial ecosystems. There are, however, two main difficulties in sample preparation for this application: contamination of samples with modern C and inhibition of graphite formation due to sulfur (S)-containing impurities. Here we evaluated these effects from three different sample preparation methods, by conducting $$^{14}$$C measurements of $$^{14}$$C-dead sample and S-rich soil samples. The preparation methods were all successful in graphite formation and $$^{14}$$C measurement for soil samples with an organic S content $$<$$ 6.9%. The different methods showed different percent Modern Carbon (pMC) values ranging from 0.19% to 0.64% for $$^{14}$$C-dead sample. However, the three methods had little influence on the determination of $$^{14}$$C age for samples at least younger than 12,000 yr BP. The methods examined in the present study can be used for $$^{14}$$C dating with sufficient accuracy in the application to C cycle studies.

Journal Articles

Quantitative evaluation of carbon dioxide emissions from the subsoils of volcanic and non-volcanic ash soils in temperate forest ecosystems

Abe, Yukiko; Nakayama, Masataka*; Atarashi-Andoh, Mariko; Tange, Takeshi*; Sawada, Haruo*; Liang, N.*; Koarashi, Jun

Geoderma, 455, p.117221_1 - 117221_11, 2025/03

 Times Cited Count:1 Percentile:29.43(Soil Science)

Subsoils (typically below a depth of 30 cm) contain more than half of global soil carbon (C) as soil organic C (SOC). However, the extent to which subsoil SOC contributes to the global C cycle and the factors that control it are unclear because quantitative evaluation of carbon dioxide (CO$$_{2}$$) emission from subsoils through direct observations is limited. This study aimed to quantify CO$$_{2}$$ emission from subsoils and determine factors that control CO$$_{2}$$ emission, focusing on the decomposability of soil organic matter (SOM) and the characteristics of the mineral-SOM association in soils. Therefore, a laboratory incubation experiment was conducted using surface soils (0-10 cm and 10-25 cm depth) and subsoils (30-45 cm and 45-60 cm depth) collected from four Japanese forest sites with two different soil types (volcanic ash and non-volcanic ash soils). The CO$$_{2}$$ emission from the subsoils was found to be responsible for 6%-23% of total CO$$_{2}$$ emission from the upper 60-cm mineral soil across all sites. Radiocarbon signatures of CO$$_{2}$$ released from the subsoils indicated the decomposition of decades-old SOM in the subsoils. The correlations between CO$$_{2}$$ emission rate and soil factors across both soil types suggested that the CO$$_{2}$$ emission from the subsoils is mainly controlled by the amounts of SOC easily available to soil microbes and microbial biomass C, not by the amounts of reactive minerals. Given the potential active participation of subsoils in terrestrial C cycling, most of the current soil C models that ignore subsoil C cycling are likely to underestimate the response of soil C to future climate change. The quantitative and mechanistic understanding of C cycling through a huge subsoil C pool is critical to accurately evaluating the role of soil C in the global C balance.

Journal Articles

Unraveling the Earth's carbon cycle using isotope analysis

Koarashi, Jun

MEXT Nuclear Fellow News; The Nuclear Researchers Exchange Program (Internet), (11), P. 17, 2025/03

no abstracts in English

Journal Articles

Comprehensive increase in CO$$_{2}$$ release by drying-rewetting cycles among Japanese forests and pastureland soils and exploring predictors of increasing magnitude

Suzuki, Yuri*; Hiradate, Shuntaro*; Koarashi, Jun; Atarashi-Andoh, Mariko; Yomogida, Takumi; Kanda, Yuki*; Nagano, Hirohiko*

Soil (Internet), 11(1), p.35 - 49, 2025/01

 Times Cited Count:3 Percentile:66.09(Soil Science)

Journal Articles

Biofilm-mediated interactions between plastics and radiocesium in coastal environments

Battulga, B.; Nakanishi, Takahiro; Atarashi-Andoh, Mariko; Otosaka, Shigeyoshi*; Koarashi, Jun

Environmental Science and Pollution Research, 31, p.60080 - 60092, 2024/10

A ubiquitous distribution of plastic debris has been reported in aquatic and terrestrial environments; however, the interactions between plastics and radionuclides and the radioactivity of environmental plastics remain largely unknown. Here, we characterize biofilms developing on the surface of plastic debris to explore the role of plastic-associated biofilms as an interaction medium between plastics and radiocesium ($$^{137}$$Cs) in the environment. Biofilm samples were extracted from plastics (1-50 mm in size) collected from two contrasting coastal areas in Japan. The radioactivity of plastics was estimated based on the $$^{137}$$Cs activity concentration of the biofilms and compared seasonally with surrounding environmental samples (i.e., sediment and sand). $$^{137}$$Cs traces were detected in biofilms with activity concentrations of 21-1300 Bq kg$$^{-1}$$ biofilm (dry weight), corresponding to 0.04-4.5 Bq kg$$^{-1}$$ plastic (dry weight). Our results reveal the interaction between $$^{137}$$Cs and plastics and provide evidence that organic and mineral components in biofilms are essential in $$^{137}$$Cs retention in environmental plastics.

Journal Articles

Dynamics and functions of microbial communities in the plastisphere in temperate coastal environments

Battulga, B.; Nakayama, Masataka; Matsuoka, Shunsuke*; Kondo, Toshiaki*; Atarashi-Andoh, Mariko; Koarashi, Jun

Water Research, 264, p.122207_1 - 122207_12, 2024/10

 Times Cited Count:22 Percentile:89.71(Engineering, Environmental)

Growing attention has been given to microbial attachment and biofilm formation on microplastics (MPs; sizes: $$<$$5 mm) in the environment. Here, we explore the microbial communities in the plastisphere to improve our understanding of microbial ecology as well as their impacts on aquatic ecosystems. Using the amplicon sequence of 16S and ITS genes, we identified bacterial and fungal community composition and diversity on MPs, surface waters, bottom sediments, and coastal sands in two contrasting coastal areas of Japan. Significantly different microbial diversity and taxonomic composition were detected depending on sample types and research sites. This research highlights the microbial metabolic functions in MP-associated biofilm, which could be the key to uncovering the true impact of plastic debris on the global ecosystem.

Journal Articles

Quantitative importance of subsoil nitrogen cycling processes in Andosols and Cambisols under temperate forests

Nakayama, Masataka; Abe, Yukiko; Atarashi-Andoh, Mariko; Tange, Takeshi*; Sawada, Haruo*; Liang, N.*; Koarashi, Jun

Applied Soil Ecology, 201, p.105485_1 - 105485_12, 2024/09

 Times Cited Count:5 Percentile:46.77(Soil Science)

Nitrogen often limits plant growth in forest ecosystems. Plants, including trees, change vertical root distribution when nutrient competition is strong within surface soil layer and take up nitrogen even from subsurface soil layers in addition to the surface soil. However, there is still limited knowledge about nitrogen cycles within deeper soil layers. In this study, we investigated the vertical profiles (0-60 cm) of the net nitrogen mineralization and nitrification rates at four Japanese forest sites with two different soil types (Andosols and Cambisols). The partial least square path modeling (PLS-PM) was used to determine factors affecting nitrogen-cycling processes. The net nitrogen mineralization and nitrification rates per unit soil weight were considerably higher in surface soil layer than in deeper soil layers in Andosols but not in Cambisols. PLS-PM analysis showed that microbial biomass and soil organic matter quantities were the main factors influencing the net nitrogen mineralization and nitrification rates, indicating that a similar mechanism creating the spatial variations of nitrogen-cycling processes in surface soil layer predominantly regulates the processes in subsoil layers. Moreover, it was estimated that the net nitrogen mineralization rate could be comparable at all soil types and depths when the rate was expressed per unit soil volume. Therefore, our results suggest that subsoil layers are a quantitatively important nitrogen source for plant nutrients in Andosols and Cambisols, supporting high forest productivity.

Journal Articles

Uncovering the characteristics of plastic-associated biofilm from the inland river system of Mongolia

Battulga, B.; Munkhbat, D.*; Matsueda, Makoto; Atarashi-Andoh, Mariko; Oyuntsetseg, B.*; Koarashi, Jun; Kawahigashi, Masayuki*

Environmental Pollution, 357, p.124427_1 - 124427_10, 2024/09

 Times Cited Count:2 Percentile:16.11(Environmental Sciences)

The occurrence and characteristics of plastic debris in aquatic and terrestrial environments have been extensively studied. However, there is still limited information on the properties and dynamic behavior of plastic-associated biofilms in the environment. In this study, we collected plastic samples from an inland river system in Mongolia and extracted biofilms from the plastics to uncover the characteristics of the biofilms using analytical, isotopic, and thermogravimetric techniques. Mixtures of organic and mineral particles were detected from extracted biofilms, revealing the plastic as a carrier for exogenous substances including contaminants in the river ecosystem. The present study provides insights into the characteristics and environmental behavior of biofilms which are useful to elucidate the impact of plastic-associated biofilms on organic matter and material cycling in the aquatic ecosystems.

Journal Articles

Sequential loss-on-ignition as a simple method for evaluating the stability of soil organic matter under actual environmental conditions

Sato, Yuhi*; Ishizuka, Shigehiro*; Hiradate, Shuntaro*; Atarashi-Andoh, Mariko; Nagano, Hirohiko*; Koarashi, Jun

Environmental Research, 239, Part 1, p.117224_1 - 117224_9, 2023/12

 Times Cited Count:13 Percentile:81.99(Environmental Sciences)

The stability of soil organic matter (SOM) is important for improving our understanding of the global carbon cycle and ongoing climate change. This study examined the applicability of loss-on-ignition of soil with a stepwise increase in temperature (SIT-LOI) to evaluate the stability of the SOM using soil samples from Japan having different organic matter (OM) and mineral contents and different mean residence times (MRTs), estimated from radiocarbon analysis, for SOM. As the result of this examination, SIT-LOI data was strongly correlated with MRTs. This clearly suggests that SIT-LOI can be an indicator evaluating the stability of SOM in actual environments.

331 (Records 1-20 displayed on this page)