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Yamasaki, Chisato*; Murakami, Katsuhiko*; Fujii, Yasuyuki*; Sato, Yoshiharu*; Harada, Erimi*; Takeda, Junichi*; Taniya, Takayuki*; Sakate, Ryuichi*; Kikugawa, Shingo*; Shimada, Makoto*; et al.
Nucleic Acids Research, 36(Database), p.D793 - D799, 2008/01
Times Cited Count:53 Percentile:70.09(Biochemistry & Molecular Biology)Here we report the new features and improvements in our latest release of the H-Invitational Database, a comprehensive annotation resource for human genes and transcripts. H-InvDB, originally developed as an integrated database of the human transcriptome based on extensive annotation of large sets of fulllength cDNA (FLcDNA) clones, now provides annotation for 120 558 human mRNAs extracted from the International Nucleotide Sequence Databases (INSD), in addition to 54 978 human FLcDNAs, in the latest release H-InvDB. We mapped those human transcripts onto the human genome sequences (NCBI build 36.1) and determined 34 699 human gene clusters, which could define 34 057 protein-coding and 642 non-protein-coding loci; 858 transcribed loci overlapped with predicted pseudogenes.
Sato, Tatsuhiko; Ishii, Mamoru*; Kataoka, Ryuho*; Kubo, Yuki*; Minoshima, Takashi*; Miyoshi, Yoshizumi*; Nagamatsu, Aiko*; Shiota, Daiko*; Takashima, Takeshi*; Yasuda, Hiroshi*
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Forecast of radiation doses for astronauts as well as aircrews due to the exposure to solar energetic particles (SEP) is one of the greatest challenges in space weather research. In last 5 years, we have developed a WArning System for AVIation Exposure to Solar energetic particles: WASAVIES. In this system, the SEP fluxes incident to the atmosphere are calculated by physics-based models, and they are converted to radiation doses using a database developed on the basis of air-shower simulation. However, it takes approximately 2.5 hours to determine the parameters used in the physics-based models after the detection of GLEs, and thus, the current WASAVIES cannot predict doses during the peak of GLEs. Therefore, we are trying to reduce the time for evaluating the parameters, as well as to develop a nowcast system for the radiation dose due to SEP exposure, under the framework of Project for Solar-Terrestrial Environment Prediction (PSTEP) in Japan. A brief outline of WASAVIES together with our future strategy will be presented at the meeting.