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Journal Articles

The H-Invitational Database (H-InvDB); A Comprehensive annotation resource for human genes and transcripts

Yamasaki, Chisato*; Murakami, Katsuhiko*; Fujii, Yasuyuki*; Sato, Yoshiharu*; Harada, Erimi*; Takeda, Junichi*; Taniya, Takayuki*; Sakate, Ryuichi*; Kikugawa, Shingo*; Shimada, Makoto*; et al.

Nucleic Acids Research, 36(Database), p.D793 - D799, 2008/01

 Times Cited Count:51 Percentile:71.25(Biochemistry & Molecular Biology)

Here we report the new features and improvements in our latest release of the H-Invitational Database, a comprehensive annotation resource for human genes and transcripts. H-InvDB, originally developed as an integrated database of the human transcriptome based on extensive annotation of large sets of fulllength cDNA (FLcDNA) clones, now provides annotation for 120 558 human mRNAs extracted from the International Nucleotide Sequence Databases (INSD), in addition to 54 978 human FLcDNAs, in the latest release H-InvDB. We mapped those human transcripts onto the human genome sequences (NCBI build 36.1) and determined 34 699 human gene clusters, which could define 34 057 protein-coding and 642 non-protein-coding loci; 858 transcribed loci overlapped with predicted pseudogenes.

Oral presentation

Progress of understanding negative triangular tokamak configuration

Kikuchi, Mitsuru; Fasoli, A.*; Takizuka, Tomonori*; Diamond, P.*; Medvedev, S.*; Duan, X.*; Zushi, Hideki*; Furukawa, Masaru*; Kishimoto, Yasuaki*; Wu, Y.*; et al.

no journal, , 

Power and particle control is challenging for standard D-shaped H-mode scenario in tokamak. Possibility of negative triangularity as innovative tokamak concept is discussed by Kikuchi et al. Experimental and numerical studies of negative triangular plasma at CRPP-EPFL success-fully demonstrated improved connement and the weakening of the SOL flow acceleration is implied for the negative triangularity. Recent studies on mechanism of type II and grassy ELM show importance of closure of second stability access to achieve small ELM regimes and also kinetic effects. Medvedev showed that closure of second stability also occurs for negative triangularity. But the MHD stability in negative triangularity is a bit more complicated so that closure of second stability does not imply easy access to small ELM regimes. We discuss critical elements behind.

Oral presentation

Measurement of radon concentration and dose evaluation in the galleries at the Mizunami Underground Research Laboratory

Aoki, Katsunori; Ogura, Hideki; Kubota, Mitsuru; Tsurudome, Koji; Ikeda, Koki; Nagasaki, Yasushi; Ogata, Nobuhisa; Furuta, Sadaaki*

no journal, , 

no abstracts in English

Oral presentation

Measurement of radon concentration and dose evaluation in the galleries of 500m depth at the Mizunami Underground Research Laboratory

Aoki, Katsunori; Ogura, Hideki; Ogata, Nobuhisa; Ikeda, Koki; Nagasaki, Yasushi; Tsurudome, Koji; Furuta, Sadaaki*

no journal, , 

no abstracts in English

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