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Journal Articles

Molecular dynamics simulations to quantify the interaction of a rigid and impenetrable precipitate with an edge dislocation in Cu

Tsugawa, Kiyoto*; Hayakawa, Sho*; Iwase, Yuki*; Okita, Taira*; Suzuki, Katsuyuki*; Itakura, Mitsuhiro; Aichi, Masaatsu*

Computational Materials Science, 210, p.111450_1 - 111450_9, 2022/07

Journal Articles

Modeling changes in the second harmonic generation of ultrasonic waves having wavelengths beyond the length scale of conventional molecular dynamics

Mori, Sho*; Matsuda, Nayuta*; Okita, Taira*; Aichi, Masaatsu*; Itakura, Mitsuhiro; Suzuki, Katsuyuki*

Materialia, 21, p.101371_1 - 101371_6, 2022/03

Journal Articles

Construction of machine-learning Zr interatomic potentials for identifying the formation process of c-type dislocation loops

Okita, Taira*; Terayama, Satoshi*; Tsugawa, Kiyoto*; Kobayashi, Keita; Okumura, Masahiko; Itakura, Mitsuhiro; Suzuki, Katsuyuki*

Computational Materials Science, 202, p.110865_1 - 110865_9, 2022/02

Journal Articles

Chemical characterization of a volatile dubnium compound, DbOCl$$_3$$

Chiera, N. M.*; Sato, Tetsuya; Eichler, R.*; Tomitsuka, Tomohiro; Asai, Masato; Adachi, Sadia*; Dressler, R.*; Hirose, Kentaro; Inoue, Hiroki*; Ito, Yuta; et al.

Angewandte Chemie; International Edition, 60(33), p.17871 - 17874, 2021/08

 Times Cited Count:0 Percentile:0(Chemistry, Multidisciplinary)

The formation and the chemical characterization of single atoms of dubnium (Db, element 105), in the form of its volatile oxychloride, was investigated using the on-line gas phase chromatography technique, in the temperature range 350 - 600 $$^circ$$C. Under the exact same chemical conditions, comparative studies with the lighter homologs of group-5 in the Periodic Table clearly indicate the volatility sequence being NbOCl$$_3 > $$ TaOCl$$_3 geq$$ DbOCl$$_3$$. From the obtained experimental results, thermochemical data for DbOCl$$_3$$ were derived. The present study delivers reliable experimental information for theoretical calculations on the chemical properties of transactinides.

Journal Articles

Molecular dynamic simulations evaluating the effect of the stacking fault energy on defect formations in face-centered cubic metals subjected to high-energy particle irradiation

Terayama, Satoshi*; Iwase, Yuki*; Hayakawa, Sho*; Okita, Taira*; Itakura, Mitsuhiro; Suzuki, Katsuyuki*

Computational Materials Science, 195, p.110479_1 - 110479_12, 2021/07

 Times Cited Count:0 Percentile:0(Materials Science, Multidisciplinary)

Journal Articles

Screw dislocation-spherical void interactions in fcc metals and their dependence on stacking fault energy

Hayakawa, Sho*; Doihara, Kohei*; Okita, Taira*; Itakura, Mitsuhiro; Aichi, Masaatsu*; Suzuki, Katsuyuki*

Journal of Materials Science, 54(17), p.11509 - 11525, 2019/09

 Times Cited Count:6 Percentile:50.98(Materials Science, Multidisciplinary)

Journal Articles

Atomistic simulations for the effects of stacking fault energy on defect formations by displacement cascades in FCC metals under Poisson's deformation

Hayakawa, Sho*; Okita, Taira*; Itakura, Mitsuhiro; Kawabata, Tomoya*; Suzuki, Katsuyuki*

Journal of Materials Science, 54(16), p.11096 - 11110, 2019/08

 Times Cited Count:3 Percentile:28.74(Materials Science, Multidisciplinary)

Journal Articles

Optimization of an isothermal gas-chromatographic setup for the chemical exploration of dubnium (Db, Z = 105) oxychlorides

Chiera, N. M.; Sato, Tetsuya; Tomitsuka, Tomohiro; Asai, Masato; Ito, Yuta; Shirai, Kaori*; Suzuki, Hayato; Tokoi, Katsuyuki; Toyoshima, Atsushi; Tsukada, Kazuaki; et al.

Journal of Radioanalytical and Nuclear Chemistry, 320(3), p.633 - 642, 2019/06

 Times Cited Count:1 Percentile:23.13(Chemistry, Analytical)

An isothermal gas-chromatographic (IGC) device has been developed and tested for on-line gas phase studies of volatile oxychlorides of short-lived group-5 transition metals. Radioisotopes of niobium and tantalum, produced in nuclear fusion evaporation reactions, are directly flushed into the IGC setup by an inert gas-jet. Oxychloride compounds are formed by the addition of SOCl$$_2$$ and O$$_2$$. Parameters influencing the formation and transport of NbOCl$$_3$$ and TaOCl$$_3$$ are investigated. For nuclides with half-lives ($$t_{1/2}$$) of about 30 s, an overall efficiency of 7% is obtained, rendering the IGC setup suitable for the chemical exploration of $$^{262}$$Db($$t_{1/2}$$ = 34s).

Journal Articles

Formation and thermochemical properties of oxychlorides of niobium (Nb) and tantalum (Ta); Towards the gas-phase investigation of dubnium (Db) oxychloride

Chiera, N. M.; Sato, Tetsuya; Tomitsuka, Tomohiro; Asai, Masato; Suzuki, Hayato*; Tokoi, Katsuyuki; Toyoshima, Atsushi; Tsukada, Kazuaki; Nagame, Yuichiro

Inorganica Chimica Acta, 486, p.361 - 366, 2019/02

 Times Cited Count:2 Percentile:24.66(Chemistry, Inorganic & Nuclear)

The formation of NbOCl$$_3$$ and TaOCl$$_3$$ and their adsorption behavior on quartz surfaces was explored by applying an isothermal gas-chromatographic method. Trace amounts of short-lived Nb and Ta isotopes were used. Adsorption enthalpy values ($$Delta H_{rm ads}$$) at zero surface coverage of -$$Delta H_{rm ads}$$(NbOCl$$_3$$) = 102 $$pm$$ 4 kJ/mol and -$$Delta H_{rm ads}$$(TaOCl$$_3$$) = 128 $$pm$$ 5 kJ/mol were determined by analyzing the chromatographic behavior of the Nb andTa complexes with a Monte-Carlo simulation method based on an adsorption-desorption kinetic model.By applying an empirical correlation, the experimental $$Delta H_{rm ads}$$ values were successively related to the macroscopic standard sublimation enthalpy, $$Delta H^circ _{rm subl}$$, as a measure of the volatility of each substance. The inferred sublimation enthalpies are in agreement with tabulated thermochemical values. Thus, the linear empirical correlation between $$Delta H_{rm ads}$$ and $$Delta H^circ _{rm subl}$$ for metal-oxychlorides was updated with the inclusion of the present data. According to the predicted $$Delta H^circ _{rm subl}$$(DbOCl$$_3$$), a $$Delta H_{rm ads}$$(DbOCl$$_3$$) value of 135 $$pm$$ 2 kJ/mol was extrapolated. The future accomplishment of comparative studies with DbOCl$$_3$$ under the same experimental conditions will provide valuable information on the volatility trend in Group-5 elements, together with an indication on the magnitude of relativistic effects on the electronic structure of dubnium.

Journal Articles

Effects of stacking fault energies on formation of irradiation-induced defects at various temperatures in face-centred cubic metals

Nakanishi, Daiki*; Kawabata, Tomoya*; Doihara, Kohei*; Okita, Taira*; Itakura, Mitsuhiro; Suzuki, Katsuyuki*

Philosophical Magazine, 98(33), p.3034 - 3047, 2018/09

 Times Cited Count:4 Percentile:36.14(Materials Science, Multidisciplinary)

By using the six sets of interatomic potentials for face-centredcubic metals that differ in the stacking fault energy (SFE) while most of the other material parameters are kept almost identical, we conducted molecular dynamics simulations to evaluate the effects of SFE on the defect formation process through collision cascades. The ratio of glissile SIA clusters tends to decrease with increasing SFE. This is because perfect loops, the edges of which split into two partial dislocations with stacking fault structures between them in most cases, prefer to form at lower SFEs. The enhanced formation of glissile SIA clusters at lower SFEs can also be observed even at increased temperature.

Journal Articles

Interactions between clusters of self-interstitial atoms via a conservative climb in BCC-Fe

Hayakawa, Sho*; Okita, Taira*; Itakura, Mitsuhiro; Aichi, Masaatsu*; Suzuki, Katsuyuki*

Philosophical Magazine, 98(25), p.2311 - 2325, 2018/06

 Times Cited Count:3 Percentile:28.45(Materials Science, Multidisciplinary)

We conduct kinetic Monte Carlo simulations for the conservative climb motion of a cluster of self-interstitial atoms towards another SIA cluster in BCC Fe; the conservative climb velocity is inversely proportional to the fourth power of the distance between them, as per the prediction based on Einstein's equation. The size of the climbing cluster significantly affects its conservative climb velocity, while the size of the cluster that originates the stress field does not. The activation energy for the conservative climb is considerably greater than that derived in previous studies and strongly dependent on the climbing cluster size.

Journal Articles

Atomic simulations to evaluate effects of stacking fault energy on interactions between edge dislocation and spherical void in face-centred cubic metals

Doihara, Kohei*; Okita, Taira*; Itakura, Mitsuhiro; Aichi, Masaatsu*; Suzuki, Katsuyuki*

Philosophical Magazine, 98(22), p.2061 - 2076, 2018/05

 Times Cited Count:9 Percentile:63.65(Materials Science, Multidisciplinary)

In this study, molecular dynamics simulations were performed to elucidate the effects of stacking fault energy (SFE) on the physical interactions between an edge dislocation and a spherical void in the crystal structure of face-centred cubic metals at various temperatures and for different void sizes. Four different types of interaction morphologies were observed, in which (1) two partial dislocations detached from the void separately, and the maximum stress corresponded to the detachment of the trailing partial; (2) two partial dislocations detached from the void separately, and the maximum stress corresponded to the detachment of the leading partial; (3) the partial dislocations detached from the void almost simultaneously without jog formation; and (4) the partial dislocations detached from the void almost simultaneously with jog formation. With an increase in void size or SFE, the interaction morphology changed in the above-mentioned order. It was observed that the magnitude of the critical resolved shear stress (CRSS) and its dependence on the SFE were determined by these interaction morphologies. The value of the CRSS in the case of interaction morphology (1) is almost equal to an analytical one based on the linear elasticity by employing the Burgers vector of a single partial dislocation. The maximum value of the CRSS is also obtained by the analytical model with the Burgers vector of the two partial dislocations.

Journal Articles

High-resolution crystal structure of copper amine oxidase from ${it Arthrobacter globiformis}$; Assignment of bound diatomic molecules as O$$_{2}$$

Murakawa, Takeshi*; Hayashi, Hideyuki*; Sunami, Tomoko; Kurihara, Kazuo; Tamada, Taro; Kuroki, Ryota; Suzuki, Mamoru*; Tanizawa, Katsuyuki*; Okajima, Toshihide*

Acta Crystallographica Section D, 69(12), p.2483 - 2494, 2013/12

 Times Cited Count:9 Percentile:60.68(Biochemical Research Methods)

The crystal structure of a Cu amine oxidase from ${it Arthrobacter globiformis}$ was determined at 1.08 ${AA}$ resolution with the use of low-molecular-weight polyethylene glycol (LMW PEG; average molecular weight $$sim$$200) as a cryoprotectant. The final crystallographic $$R$$-factor and $$R$$$$_{rm free}$$ value are 13.0% and 15.0%, respectively. Several molecules of LMW PEG were found to occupy cavities in the protein interior including the active site, which resulted in the marked reduction of the overall ${it B}$ factor and consequently led to a sub-atomic resolution structure for a relatively large protein with a monomer molecular weight of $$sim$$70,000. About 40% of all the presumed hydrogen atoms were observed as clear electron densities in the $$F$$$$_{rm o}$$ - $$F$$$$_{rm c}$$ difference map. Multiple minor conformers were also identified for many residues. Anisotropic displacement fluctuations were evaluated in the active site that contains a post-translationally derived quinone cofactor and a Cu atom. Furthermore, diatomic molecules, most likely molecular oxygen, are bound to the protein, one of which is located in the region that has been previously proposed as an entry route for the substrate dioxygen from the central cavity of the dimer interface to the active site.

Journal Articles

Evaluation of the relative biological effectiveness of carbon ion beams in the cerebellum using the rat organotypic slice culture system

Yoshida, Yukari*; Suzuki, Yoshiyuki*; Al-Jahdari, W. S.*; Hamada, Nobuyuki*; Funayama, Tomoo; Shirai, Katsuyuki*; Kato, Hiroyuki*; Sakashita, Tetsuya; Kobayashi, Yasuhiko; Nakano, Takashi*

Journal of Radiation Research, 53(1), p.87 - 92, 2012/02

 Times Cited Count:8 Percentile:46.47(Biology)

Journal Articles

Effectiveness of carbon-ion beams for apoptosis induction in rat primary immature hippocampal neurons

Kaminuma, Takuya*; Suzuki, Yoshiyuki*; Shirai, Katsuyuki*; Mizui, Toshiyuki*; Noda, Shinei*; Yoshida, Yukari*; Funayama, Tomoo; Takahashi, Takeo*; Kobayashi, Yasuhiko; Shirao, Tomoaki*; et al.

Journal of Radiation Research, 51(6), p.627 - 631, 2010/11

 Times Cited Count:9 Percentile:37.34(Biology)

Journal Articles

Simple orchestration application framework to control "Burning Plasma Integrated Code"

Tatekawa, Takayuki; Nakajima, Kohei*; Teshima, Naoya; Kim, G.; Suzuki, Yoshio; Takemiya, Hiroshi; Hayashi, Nobuhiko; Iba, Katsuyuki*

Proceedings of 3rd International Joint Conference on Computational Sciences and Optimization (CSO 2010), p.322 - 326, 2010/05

Journal Articles

Web-based Java application to advanced JT-60 Man-Machine interfacing system for remote experiments

Totsuka, Toshiyuki; Suzuki, Yoshio; Sakata, Shinya; Oshima, Takayuki; Iba, Katsuyuki*

Fusion Engineering and Design, 83(2-3), p.287 - 290, 2008/04

 Times Cited Count:1 Percentile:10.92(Nuclear Science & Technology)

no abstracts in English

Journal Articles

Research and development of fusion grid infrastructure based on Atomic Energy Grid InfraStructure (AEGIS)

Suzuki, Yoshio; Nakajima, Kohei; Kushida, Noriyuki; Kino, Chiaki; Aoyagi, Tetsuo; Nakajima, Norihiro; Iba, Katsuyuki*; Hayashi, Nobuhiko; Ozeki, Takahisa; Totsuka, Toshiyuki; et al.

Fusion Engineering and Design, 83(2-3), p.511 - 515, 2008/04

 Times Cited Count:3 Percentile:25.63(Nuclear Science & Technology)

In collaboration with the Naka Fusion Institute of Japan Atomic Energy Agency (NFI/JAEA) and the National Institute for Fusion Science of National Institute of Natural Science (NIFS/NINS), Center for Computational Science and E-systems of Japan Atomic Energy Agency (CCSE/JAEA) aims at establishing an integrated framework for experiments and analyses in nuclear fusion research based on the Atomic Energy Grid InfraStructure (AEGIS). AEGIS has been being developed by CCSE/JAEA aiming at providing the infrastructure that enables atomic energy researchers in remote locations to carry out R&D efficiently and collaboratively through the Internet. Toward establishing the integrated framework, we have been applying AEGIS to pre-existing three systems.

Journal Articles

Development and verification of remote research environment based on "Fusion research grid"

Iba, Katsuyuki*; Ozeki, Takahisa; Totsuka, Toshiyuki; Suzuki, Yoshio; Oshima, Takayuki; Sakata, Shinya; Sato, Minoru; Suzuki, Mitsuhiro; Hamamatsu, Kiyotaka; Kiyono, Kimihiro

Fusion Engineering and Design, 83(2-3), p.495 - 497, 2008/04

 Times Cited Count:4 Percentile:31.93(Nuclear Science & Technology)

Fusion research grid is an environment of collaborative researches using a network that connects scientists far apart and let them collaborate effectively over the difference in time and distance in a nuclear fusion research. Fundamental technology of Fusion research grid has been developed at JAEA in the VizGrid project under the e-Japan project at Ministry of Education, Culture, Sports, Science and Technology (MEXT). Remote research environments of experiments, diagnostics, analyses and communications were developed on Fusion research grid. We have developed prototype systems that include a remote experiment system, a remote diagnostics system, and a remote analysis system. All users can access these systems from anywhere because Fusion research grid does not required closed network like Super SINet to maintain security. The prototype systems were verified in experiments at JT-60U and their availability was confirmed.

Journal Articles

Development of probabilistic fracture mechanics analysis code PASCAL ver.2 for reactor pressure vessel

Osakabe, Kazuya; Onizawa, Kunio; Shibata, Katsuyuki; Suzuki, Masahide

Nihon Genshiryoku Gakkai Wabun Rombunshi, 6(2), p.161 - 171, 2007/06

As a part of the materials aging degradation and structural integrity research for LWR components, the probabilistic fracture mechanics (PFM) analysis code PASCAL has been developed in JAEA. This code evaluates the conditional probabilities of crack initiation and fracture of a reactor pressure vessel (RPV) under transient conditions such as pressurized thermal shock (PTS). A standardized analysis method is proposed on the basis of the development of PASCAL ver.2 and results of sensitivity analyses. Graphical user interface (GUI) including the standardized analysis method as default settings and values has been also developed for PASCAL ver.2. A case study showed that non-destructive examination with good performance had a more significant effect on the probability of failure than non-destructive examinations repeated with low performance.

76 (Records 1-20 displayed on this page)