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Journal Articles

Site-specific relaxation of peptide bond planarity induced by electrically attracted proton/deuteron observed by neutron crystallography

Chiba, Kaori*; Matsui, Takuro*; Chatake, Toshiyuki*; Ohara, Takashi; Tanaka, Ichiro*; Yutani, Katsuhide*; Niimura, Nobuo*

Protein Science, 32(10), p.e4765_1 - e4765_13, 2023/10

 Times Cited Count:0 Percentile:0(Biochemistry & Molecular Biology)

Journal Articles

Anomaly of structural relaxation in complex liquid metal of bismuth; Dynamic correlation function of coherent quasi-elastic neutron scattering

Kawakita, Yukinobu; Kikuchi, Tatsuya*; Inamura, Yasuhiro; Tahara, Shuta*; Maruyama, Kenji*; Hanashima, Takayasu*; Nakamura, Mitsutaka; Kiyanagi, Ryoji; Yamauchi, Yasuhiro*; Chiba, Kaori*; et al.

Physica B; Condensed Matter, 551, p.291 - 296, 2018/12

 Times Cited Count:11 Percentile:48.06(Physics, Condensed Matter)

There are elemental liquid metals with complex structures far from the hard sphere (HS) packing model. Liquid Bi has an asymmetric first peak in the structure factors S(Q). The pair distribution function g(r) exhibits strange distance ratio of 1:2 between the first and the second peaks. Since a HS model with two kinds of radius produces asymmetry of the main peak in S(Q), existence of short-lived covalent bonds was discussed. Contrarily, modulation of the atomic distribution by the Friedel oscillations of shielding electrons around metallic ions was discussed. To examine its bonding nature from viewpoints of dynamic correlation functions, we have measured neutron quasielastic scattering of liquid Bi by using cold disk chopper spectrometer installed at MLF of J-PARC. The van Hove function revealed that the shoulder structure located at a longer side of the first peak in g(r) exhibits a longer relaxation time than the main structures such as the first and second peaks.

JAEA Reports

ROSA-I Program Test Result; An Investigation on Primary Coolant Behavior During LOCA

; ; ; ; ; ; ; ; ; ; et al.

JAERI-M 6318, 157 Pages, 1975/11

JAERI-M-6318.pdf:5.95MB

no abstracts in English

Oral presentation

Cluster effect on damage at a Si surface bombarded with 10-540 keV C$$_{60}$$ ions

Narumi, Kazumasa; Naramoto, Hiroshi*; Yamada, Keisuke; Chiba, Atsuya; Saito, Yuichi; Morita, Yosuke*; Nakajima, Kaoru*; Kimura, Kenji*; Maeda, Yoshihito

no journal, , 

no abstracts in English

Oral presentation

Cluster effect on radiation damage in Si bombarded with 10-540-keV C$$_{60}$$ ions

Narumi, Kazumasa; Naramoto, Hiroshi*; Yamada, Keisuke; Chiba, Atsuya; Saito, Yuichi; Morita, Yosuke*; Nakajima, Kaoru*; Kimura, Kenji*; Maeda, Yoshihito

no journal, , 

no abstracts in English

Oral presentation

Cluster effects in collisional processes in a Si crystal bombarded with 10-540-keV C$$_{60}$$ ions

Narumi, Kazumasa; Naramoto, Hiroshi*; Yamada, Keisuke; Chiba, Atsuya; Saito, Yuichi; Morita, Yosuke*; Nakajima, Kaoru*; Kimura, Kenji*; Maeda, Yoshihito

no journal, , 

We have investigated cluster effects on damage accumulation and sputtering yield in bombardment of a Si crystal with 10-540-keV C$$_{60}$$ ions. Fluence dependence of the areal density of displaced Si atoms can be well described by assuming a cylindrical volume affected by single-C$$_{60}$$-ion bombardment, which means an ion-track-like picture in damage accumulation in Si bombarded with keV C$$_{60}$$ ions. The energy dependence of the number of displaced Si atoms by single-C$$_{60}$$-ion bombardment, N$$_{D60}$$, is different from that of N$$_{D1}$$ by monatomic-C-ion bombardment calculated with SRIM2008. The number ratio of displaced Si atoms per C atom N$$_{D60}$$/(60$$times$$N$$_{D1}$$) which demonstrates the magnitude of the nonlinear effect on damage in Si has shown that the effect is huge and has the maximum around 100 keV. The energy dependence of the ratio can be explained qualitatively by nuclear stopping powers and increase of internuclear distances between C atoms in Si. The sputtering yield has the maximum, ca. 600 per C$$_{60}$$ ion, around 100 keV. Comparing with the monatomic-ion-induced sputtering yield predicted by the linear-cascade theory by Sigmund, nonlinear effect on sputtering yield has been found. It depends on the ion energy: It is more pronounced around the energy where the sputtering yield has the maximum and hardly observed at 10 keV. No n$$^{2}$$ dependence is found, where n is the number of atoms consisting of the projectile cluster.

Oral presentation

Cluster effect on damage accumulation in a Si crystal bombarded with 10-540-keV C$$_{60}$$ ions

Narumi, Kazumasa; Naramoto, Hiroshi*; Yamada, Keisuke; Chiba, Atsuya; Saito, Yuichi; Morita, Yosuke*; Nakajima, Kaoru*; Kimura, Kenji*; Maeda, Yoshihito

no journal, , 

no abstracts in English

Oral presentation

Wake effects on fast molecular transmission through a nanocapillary

Tsuchida, Hidetsugu*; Nakajima, Kaoru*; Yokoe, Junya*; Sugiyama, Motohiko*; Ota, Yushi*; Majima, Takuya*; Shibata, Hiromi*; Tomita, Shigeo*; Sasa, Kimikazu*; Hirata, Koichi*; et al.

no journal, , 

no abstracts in English

Oral presentation

Time-space correlation function of liquid metals with complex static structure deduced from pulsed neutron experiment

Kawakita, Yukinobu; Kikuchi, Tatsuya*; Inamura, Yasuhiro; Tahara, Shuta*; Maruyama, Kenji*; Hanashima, Takayasu*; Nakamura, Mitsutaka; Kiyanagi, Ryoji; Yamauchi, Yasuhiro*; Chiba, Kaori*; et al.

no journal, , 

There are many polyvalent liquid metals with complex structure which cannot be reproduced by random packing model. To explain such complexity, coexistence of metallic and covalent bonds, dynamic model of short-lived covalent bonds, and quasi-crystal model where Peierls distortion still remains even in liquid phase have been proposed from structure analyses and theoretical calculations. To obtain concrete picture experimentally for complex structure, it is indispensable to measure dynamic structure with precise statistical accuracy. We performed inelastic neutron scattering of liquid bismuth by using AMATERAS installed at MLF in J-PARC and deduced its time-space correlation function. We got evidence that structure of Peierls distortion remains even in liquid by evaluating difference in relaxation time at specific atomic distances characterized by double layered structure.

Oral presentation

Structural relaxation and time-space correlation function of liquid metals with complex structure

Kawakita, Yukinobu; Kikuchi, Tatsuya*; Inamura, Yasuhiro; Tahara, Shuta*; Maruyama, Kenji*; Hanashima, Takayasu*; Nakamura, Mitsutaka; Kiyanagi, Ryoji; Yamauchi, Yasuhiro*; Chiba, Kaori*; et al.

no journal, , 

We have performed coherent quasielastic neutron scattering experiment for liquid polyvalent metals which has complicated static structure not reproduced by a hard-sphere packing model, by utilizing AMATERAS spectrometer in J-PARC. It has been considered that, for Bi and Sb, a double-layered structure originated from Peierls distortion which is seen in solid crystalline phase remains even in their liquid phases. We have succeeded in detection of such Peierls distortion structure in liquid by difference in structural relaxation time at corresponding charateristic interatomic distances in the deduced time-space correlation function.

Oral presentation

Real time and real space analysis for atomic dynamics in liquids

Kawakita, Yukinobu; Kikuchi, Tatsuya*; Inamura, Yasuhiro; Tahara, Shuta*; Maruyama, Kenji*; Hanashima, Takayasu*; Nakamura, Mitsutaka; Kiyanagi, Ryoji; Yamauchi, Yasuhiro*; Chiba, Kaori*; et al.

no journal, , 

We have developed analysis method to reduce the so-call van Hove function, a time-space correlation function, through the regularization method for coherent quasielastic neutron scattering (QENS) of liquids. In principle, the van Hove function in r-t space can be obtained by double Fourier transform from dynamic structure factor in Q-E space. Instead of a direct function estimation of the van Hove function through the regularization method which easily involves systematical deviation of the calculated dynamic structure factor from the experimental dynamic structure factor, we used a mediation function between them and estimated it through the regularization method. We will discuss with the properties of the mediation function and the obtained van Hove function and the calculated dynamic structure factor with an example of liquid metals with complex static structure such as Bi and Sb whose QENS were measured by AMATERAS spectrometer in J-PARC.

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