The H-Invitational Database (H-InvDB); A Comprehensive annotation resource for human genes and transcripts

Yamasaki, Chisato*; Murakami, Katsuhiko*; Fujii, Yasuyuki*; Sato, Yoshiharu*; Harada, Erimi*; Takeda, Junichi*; Taniya, Takayuki*; Sakate, Ryuichi*; Kikugawa, Shingo*; Shimada, Makoto*; et al.

Nucleic Acids Research, 36(Database), p.D793 - D799, 2008/01

https://doi.org/10.1093/nar/gkm999

Here we report the new features and improvements in our latest release of the H-Invitational Database, a comprehensive annotation resource for human genes and transcripts. H-InvDB, originally developed as an integrated database of the human transcriptome based on extensive annotation of large sets of fulllength cDNA (FLcDNA) clones, now provides annotation for 120 558 human mRNAs extracted from the International Nucleotide Sequence Databases (INSD), in addition to 54 978 human FLcDNAs, in the latest release H-InvDB. We mapped those human transcripts onto the human genome sequences (NCBI build 36.1) and determined 34 699 human gene clusters, which could define 34 057 protein-coding and 642 non-protein-coding loci; 858 transcribed loci overlapped with predicted pseudogenes.

Long-term monitoring soil carbon dynamics of Asian terrestrial ecosystem by an automated chamber network

Liang, N.*; Chiang, P.-N.*; Wang, Y.*; Teramoto, Munemasa*; Takagi, Kentaro*; Kondo, Toshiaki*; Koarashi, Jun; Zhang, Y.*; Li, S.*; Fang, J.*; et al.

no journal, , 

Long-term response and feedback of Asian terrestrial ecosystems carbon cycle to global warming

Liang, N.*; Zhang, Y.*; Chiang, P.-N.*; Lai, D.*; Teramoto, Munemasa*; Takagi, Kentaro*; Kondo, Toshiaki*; Koarashi, Jun; Wang, Y.*; Li, S.*; et al.

no journal, , 

Data-driven estimation of soil respiration in Japan; Development and intercomparison

Yamanuki, Hina*; Ichii, Kazuhito*; Yamamoto, Yuhei*; Kotsuki, Shunji*; Teramoto, Munemasa*; Sun, L.*; Nagano, Hirohiko*; Hirano, Takashi*; Takagi, Kentaro*; Ishida, Sachinobu*; et al.

no journal, , 

no abstracts in English

Temporal and spatial variation of soil CO/CH fluxes in two cool-temperate forests in Japan

Sun, L.*; Liang, N.*; Hirano, Takashi*; Takahashi, Yoshiyuki*; Teramoto, Munemasa*; Takagi, Kentaro*; Kondo, Toshiaki*; Koarashi, Jun; Atarashi-Andoh, Mariko; Ide, Reiko*; et al.

no journal, , 

Impacts of experiment warming on soil CO emissions and CH uptake in Japanese forests

Sun, L.*; Liang, N.*; Takagi, Kentaro*; Ishida, Sachinobu*; Takagi, Masahiro*; Teramoto, Munemasa*; Kondo, Toshiaki*; Koarashi, Jun; Atarashi-Andoh, Mariko; Zeng, J.*; et al.

no journal, , 

Factors of spatial variation in soil CH uptake rate in forests in Western Honshu

Teramoto, Munemasa*; Liang, N.*; Sun, L.*; Kondo, Toshiaki*; Koarashi, Jun; Atarashi-Andoh, Mariko; Takagi, Masahiro*; Yamanaka, Norikazu*; Hirano, Takashi*; Takagi, Kentaro*; et al.

no journal, , 

Spatiotemporal variation in soil CH flux in a regrowing deciduous forest after a severe typhoon disturbance

Hirano, Takashi*; Sakaguchi, Kaho*; Yamashita, Shumpei*; Cui, R.*; Hu, R.*; Sun, L.*; Liang, N.*; Teramoto, Munemasa*; Takagi, Kentaro*; Ishida, Sachinobu*; et al.

no journal, , 

no abstracts in English

Analysis of temporal variation of exchange of trace gases including CH in larch forest soils located on volcanic ash soils

Takahashi, Yoshiyuki*; Sun, L.*; Liang, N.*; Teramoto, Munemasa*; Takagi, Kentaro*; Hirano, Takashi*; Kondo, Toshiaki*; Koarashi, Jun; Atarashi-Andoh, Mariko; Takagi, Masahiro*; et al.

no journal, , 

no abstracts in English

Response of methanogenic and methanotrophic bacteria to global warming and its effects on soil methane uptake

Kondo, Toshiaki*; Teramoto, Munemasa*; Sun, L.*; Takagi, Kentaro*; Koarashi, Jun; Atarashi-Andoh, Mariko; Ichii, Kazuhito*; Hirano, Takashi*; Ishida, Sachinobu*; Takagi, Masahiro*; et al.

no journal, , 

no abstracts in English