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Journal Articles

Identification of PprM; A Modulator of the PprI-dependent DNA damage response in ${it Deinococcus radiodurans}$

Oba, Hirofumi; Sato, Katsuya; Sghaier, H.; Yanagisawa, Tadashi*; Narumi, Issei

Extremophiles, 13(3), p.471 - 479, 2009/05

 Times Cited Count:20 Percentile:40.47(Biochemistry & Molecular Biology)

${it Deinococcus radiodurans}$ possesses a DNA damage response mechanism that acts via the PprI protein to induce RecA and PprA proteins, both of which are necessary in conferring extreme radioresistance. In an effort to further delineate the nature of the DNA damage response mechanism in ${it D. radiodurans}$, we set out to identify novel components of the PprI-dependent signal transduction pathway in response to radiation stress. Here we demonstrate the discovery of a novel regulatory protein, PprM (a modulator of the PprI-dependent DNA damage response), which is a homolog of cold shock protein (Csp). Disruption of the ${it pprM}$ gene rendered ${it D. radiodurans}$ significantly sensitive to $$gamma$$-rays. PprM regulates the induction of PprA but not that of RecA. PprM belongs in a distinct clade of a subfamily together with Csp homologs from ${it D. geothermalis}$ and ${it Thermus thermophilus}$. Purified PprM is present as a homodimer under physiological conditions, as the case with ${it Escherichia coli}$ CspD. The ${it pprA pprM}$ double-disruptant strain exhibited higher sensitivity than the ${it pprA}$ or ${it pprM}$ single disruptant strains, suggesting that PprM regulates other hitherto unknown protein(s) important for radioresistance besides PprA. This study strongly suggests that PprM is involved in the radiation response mediated by PprI in ${it D. radiodurans}$.

Journal Articles

Discovery of a novel key protein in the radiation response mechanism of ${it Deinococcus radiodurans}$

Oba, Hirofumi; Sato, Katsuya; Kikuchi, Masahiro; Sghaier, H.; Yanagisawa, Tadashi*; Narumi, Issei

JAEA-Review 2008-055, JAEA Takasaki Annual Report 2007, P. 57, 2008/11

no abstracts in English

Journal Articles

The Radiation responsive promoter of the ${it Deinococcus radiodurans pprA}$ gene

Oba, Hirofumi; Sato, Katsuya; Yanagisawa, Tadashi*; Narumi, Issei

JAEA-Review 2006-042, JAEA Takasaki Annual Report 2005, P. 70, 2007/02

no abstracts in English

Journal Articles

The Radiation responsive promoter of the ${it Deinococcus radiodurans pprA}$ gene

Oba, Hirofumi*; Sato, Katsuya*; Yanagisawa, Tadashi*; Narumi, Issei

Gene, 363, p.133 - 141, 2005/12

 Times Cited Count:35 Percentile:54.68(Genetics & Heredity)

Three transcriptional start points for the ${it Deinococcus radioduans pprA}$ were located at positions -156, -154 and -22 upstream from the ${it pprA}$ translation initiation site. The amount of the three extended products increased in cells exposed to 2-kGy followed by a 0.5-h post-incubation, suggesting the existence of at least two radiation responsive promoters for ${it pprA}$ expression. A luciferase reporter assay revealed that the distal promoter is located between positions -208 and -156 from the translation initiation site, while the proximal promoter is located between positions -57 and -22. The region located between positions -57 and -38 was indispensable for proximal promoter activity. Site-directed mutagenesis of a thymine positioned at -33 resulted in severe impairment of promoter activity, and suggested that the thymine functions as a master base for the proximal radiation responsive promoter. The results also suggested that up-regulation of ${it pprA}$ expression by the ${it pprI}$ gene product is triggered at the promoter level.

Journal Articles

Characterization and distribution of IS${it 8301}$ in the radioresistant bacterium ${it Deinococcus radiodurans}$

Islam, M. S.*; Hua, Y.*; Oba, Hirofumi; Sato, Katsuya; Kikuchi, Masahiro; Yanagisawa, Tadashi*; Narumi, Issei

Genes and Genetic Systems, 78(5), p.319 - 327, 2003/10

 Times Cited Count:14 Percentile:27.6(Biochemistry & Molecular Biology)

no abstracts in English

Journal Articles

Characterization of RecA424 and RecA670 proteins from ${it Deinococcus radiodurans}$

Sato, Katsuya; Narumi, Issei; Kikuchi, Masahiro; Kitayama, Shigeru; Yanagisawa, Tadashi*; Yamamoto, Kazuo; Watanabe, Hiroshi

Journal of Biochemistry, 131(1), p.121 - 129, 2002/01

 Times Cited Count:25 Percentile:38.61(Biochemistry & Molecular Biology)

RecA protein is considered to be the most important participant in the radiation resistance of ${it Deinococcus radiodurans}$. We identified a new ${it recA}$ mutation (${it recA424}$) in the DNA-repair deficient mutant strain KI696, the phenotype of which is remarkably different from mutant strain rec30 carrying ${it recA670}$. In vitro, neither RecA424 nor RecA670 could promote DNA strand exchange, indicating that both RecA424 and Rec670 are defective in recombination activity. RecA424 promoted the autocleavage reaction of LexA in vitro, whereas RecA670 did not. The LexA level in KI696 was decreased following $$gamma$$-irradiation. However, the LexA level in strain rec30 was constant irrespective of irradiation. These results indicate that RecA424 retains co-protease activity, whereas RecA670 does not. While strain rec30 is extremely radiation sensitive, strain KI696 is only slightly sensitive. Together, these observations suggest that the co-protease activity rather than the recombination activity of RecA contributes to the radiation resistance in ${it D. radiodurans}$.

Journal Articles

The LexA protein from ${it Deinococcus radiodurans}$ is not involved in RecA induction following $$gamma$$ irradiation

Narumi, Issei; Sato, Katsuya; Kikuchi, Masahiro; Funayama, Tomoo; Yanagisawa, Tadashi*; Kobayashi, Yasuhiko; Watanabe, Hiroshi; Yamamoto, Kazuo

Journal of Bacteriology, 183(23), p.6951 - 6956, 2001/12

 Times Cited Count:89 Percentile:83.76(Microbiology)

The involvement of LexA in induction of RecA was investigated in ${it Deinococcus radiodurans}$. As in the wild-type strain, an increase in RecA protein synthesis following $$gamma$$ irradiation was detected in a ${it lexA}$ disruptant, indicating that LexA is not involved in the induction of RecA in ${it D. radiodurans}$.

Journal Articles

Molecular analysis of the Deinococcus radiodurans recA locus and identification of a mutation site in a DNA repair-deficient mutant, rec30

Narumi, Issei; Sato, Katsuya; Kikuchi, Masahiro; Funayama, Tomoo; Kitayama, Shigeru; Yanagisawa, Tadashi*; Watanabe, Hiroshi; Yamamoto, Kazuo

Mutation Research; DNA Repair, 435(3), p.233 - 243, 1999/00

no abstracts in English

Oral presentation

Analysis of the radiation responsive promoter of the ${it Deinococcus radiodurans pprA}$ gene

Oba, Hirofumi*; Sato, Katsuya*; Yanagisawa, Tadashi*; Narumi, Issei

no journal, , 

no abstracts in English

Oral presentation

Analysis of radiation responsive promoter of the ${it Deinococcus radiodurans pprA}$ gene

Oba, Hirofumi*; Sato, Katsuya*; Yanagisawa, Tadashi*; Narumi, Issei

no journal, , 

no abstracts in English

Oral presentation

Radiation response mechanism of the radioresistant bacterium ${it Deinococcus radiodurans}$; A Novel key protein "PprM"

Oba, Hirofumi; Sghaier, H.; Sato, Katsuya; Yanagisawa, Tadashi*; Narumi, Issei

no journal, , 

PprI, which is unique to ${it D. radiodurans}$, is invoked by present data as the most important protein for radiation response mechanism. However, despite the interest in mechanism underlying the radiation response in ${it D. raidodurans}$, little is known about the exact function of PprI protein. In this study, functional analysis of PprI protein was performed. Western blot analysis and gel shift assay suggested that PprI itself does not control directly the expression of ${it pprA}$ and ${it recA}$. We identified a novel regulatory protein PprM by 2D-PAGE. ${it pprM}$-disruptant strain showed significant sensitivity to $$gamma$$-rays. Western blot analysis revealed that PprM involves in RecA and PprA induction. By reporter assay it was found that PprM protein regulates the ${it pprA}$ expression at the promoter level. These results suggest that PprM is involved in the unique radiation response mechanism controlled by PprI in ${it D. radiodurans}$.

Oral presentation

Analysis of the radiation responsive promoter of the ${it Deinococcus radiodurans pprA}$ gene

Oba, Hirofumi; Sato, Katsuya; Yanagisawa, Tadashi*; Narumi, Issei

no journal, , 

no abstracts in English

Oral presentation

Discovery of a novel key protein in the radiation response mechanism of ${it Deinococcus radiodurans}$

Oba, Hirofumi; Sato, Katsuya; Kikuchi, Masahiro; Narumi, Issei; Sghaier, H.*; Yanagisawa, Tadashi*

no journal, , 

no abstracts in English

13 (Records 1-13 displayed on this page)
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